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Fix SPAdes version requirement: 3.14+
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rrwick committed Jan 18, 2022
1 parent 54a2943 commit 6f12fae
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Showing 2 changed files with 10 additions and 13 deletions.
10 changes: 8 additions & 2 deletions test/test_misc.py
Original file line number Diff line number Diff line change
Expand Up @@ -369,10 +369,16 @@ def test_spades_version_status_8(self):
self.assertEqual(unicycler.misc.spades_status_from_version('3.13.0'), 'too old')

def test_spades_version_status_9(self):
self.assertEqual(unicycler.misc.spades_status_from_version('3.13.1'), 'good')
self.assertEqual(unicycler.misc.spades_status_from_version('3.13.1'), 'too old')

def test_spades_version_status_10(self):
self.assertEqual(unicycler.misc.spades_status_from_version('3.14.1'), 'good')
self.assertEqual(unicycler.misc.spades_status_from_version('3.14.0'), 'good')

def test_spades_version_status_11(self):
self.assertEqual(unicycler.misc.spades_status_from_version('3.14.1'), 'good')

def test_spades_version_status_12(self):
self.assertEqual(unicycler.misc.spades_status_from_version('3.15.3'), 'good')

def test_spades_version_status_13(self):
self.assertEqual(unicycler.misc.spades_status_from_version('4.0.0'), 'too new')
13 changes: 2 additions & 11 deletions unicycler/misc.py
Original file line number Diff line number Diff line change
Expand Up @@ -849,19 +849,10 @@ def spades_status_from_version(version):
assert major_version == 3

minor_version = int(version.split('.')[1])
if minor_version < 13:
if minor_version < 14:
return 'too old'
assert minor_version >= 13

patch_version = int(version.split('.')[2])
if minor_version > 13:
else:
return 'good'
assert minor_version == 13
if minor_version == 13:
if patch_version < 1:
return 'too old'
else:
return 'good'


def racon_path_and_version(racon_path):
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