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Commits on May 11, 2021

• Change Groovy comments everywhere

  drpatelh

  committed
  1ceb722

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• Fix EClint

  drpatelh

  committed
  6a8da1e

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• Fix merge conflicts

  drpatelh

  committed
  ade7058

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• Fix merge conflicts

  drpatelh

  committed
  a512649

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• First pass EC lint fix

  drpatelh

  committed
  74f9359

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• Template update for nf-core/tools version 1.14

  nf-core-bot

  committed
  07ae077

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Commits on May 7, 2021

• Add function to check number of variants per sample

  drpatelh

  committed
  19ff154

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• Remove tracedir assertion for awsbatch profile

  drpatelh

  committed
  61304fe

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Commits on May 6, 2021

• Add function to parse Pangolin lineage file

  drpatelh

  committed
  a957b3f

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Commits on May 4, 2021

• Fix indents

  drpatelh

  committed
  988b651

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• Delete duplicate functions

  drpatelh

  committed
  f6eb70d

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• Get tests working for all workflows

  drpatelh

  committed
  42d6784

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• Re-organise Groovy lib/ classes

  drpatelh

  committed
  736dfad

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Commits on Apr 28, 2021

• Use variable for covid19genome

  drpatelh

  committed
  c989fcb

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Commits on Apr 27, 2021

• Add warning for nf-core#170

  drpatelh

  committed
  ece8c56

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Commits on Apr 26, 2021

• Add function to parse fastp json file

  drpatelh

  committed
  606d744

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• Fix comments

  drpatelh

  committed
  588ddd2

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• Finesse workflow functions

  drpatelh

  committed
  e33d820

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Commits on Apr 22, 2021

• Use private and public class definitions where applicable

  drpatelh

  committed
  4216978

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Commits on Apr 21, 2021

• Only print warning if multiqc_report isn't empty

  drpatelh

  committed
  ce8d8ff

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• Use custom function to join args for modules

  drpatelh

  committed
  2a1c820

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Commits on Apr 14, 2021

• Update regex for day duration unit

  drpatelh

  committed
  930ad9d

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Commits on Apr 6, 2021

• Add parameter validation

  drpatelh

  committed
  73b1431

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• Fix merge conflicts

  drpatelh

  committed
  2c582b8

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Commits on Mar 23, 2021

• Template update for nf-core/tools version 1.13.2

  nf-core-bot

  committed
  647056a

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Commits on Mar 18, 2021

• Template update for nf-core/tools version 1.13

  nf-core-bot

  committed
  8a37a4a

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Commits on Feb 16, 2021

• Add in medaka model validation

  drpatelh

  committed
  d7162ce

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• Minor tweaks

  drpatelh

  committed
  2ca02c4

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• Tweak parameter validation

  drpatelh

  committed
  5533a5c

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Commits on Feb 15, 2021

• Add validation for new primer set config

  drpatelh

  committed
  7bae016

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• Move param validation to lib

  drpatelh

  committed
  849ac0f

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Commits on Feb 14, 2021

• Separate functions for Illumina and Nanopore

  drpatelh

  committed
  acfae09

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Commits on Feb 12, 2021

• Blasted empty channels

  drpatelh

  committed
  c71d006

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• Rename function

  drpatelh

  committed
  0e31099

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• Add function to check primer suffixes

  drpatelh

  committed
  eaa4f88

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