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Achievements

Achievement: Starstruckx3Achievement: QuickdrawAchievement: Pull Sharkx2Achievement: Arctic Code Vault Contributor

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  • stix Public

    Structural Variant Index

    C 71 4 MIT License Updated Dec 13, 2024

  • giggle Public

    Interval data structure

    C 231 30 MIT License Updated Dec 5, 2024

  • layerlab Public

    Forked from ryanlayerlab/layerlab
    Updated Oct 29, 2024

  • tools Public

    Smaller projects

    Perl 1 3 Updated Oct 18, 2024

  • samplot Public

    Plot structural variant signals from many BAMs and CRAMs

    Python 538 69 MIT License Updated Jul 13, 2024

  • ssec2 Public

    Stupid Simple Elastic Compute Cloud

    Shell 16 5 Updated Dec 7, 2023

  • ssshtest Public

    Stupid Simple (ba)Sh Testing - A functional software testing framwork

    Shell 23 3 MIT License Updated Nov 8, 2023

  • sdlgks-dlagkfals Public

    Updated Sep 14, 2023

  • class_test Public

    Updated Sep 5, 2023

  • algorithms Public

    Python Updated May 9, 2023

  • cmd2web Public

    Create web interfaces for command line utilities.

    Python 9 3 MIT License Updated Dec 8, 2022

  • ci Public

    Forked from swe4s/ci

    Continuous Integration

    Python 1 Updated Oct 12, 2022

  • COvid19 Public

    Providing social distancing situational awareness during the COVID-19 pandemic in Colorado

    Python 6 4 MIT License Updated Jun 22, 2022

  • stix_paper Public

    Analysis for the STIX paper

    Python 2 MIT License Updated Nov 8, 2021

  • gqt Public

    A genotype query interface.

    C 135 24 MIT License Updated Mar 29, 2021

  • animal_svs Public

    2 MIT License Updated Sep 28, 2020

  • new_repo Public

    SWE4S tests (python)

    Python MIT License Updated Sep 3, 2020

  • software-project Public

    Short description that will help you and others find this

    Python MIT License Updated Aug 19, 2020

  • github-markdown-toc Public

    Forked from ekalinin/github-markdown-toc

    Easy TOC creation for GitHub README.md

    Shell MIT License Updated Apr 29, 2020

  • git_grading_test Public

    Updated Sep 13, 2019

  • cs Public

    Data structures and algorithms

    C 9 2 Updated Jun 7, 2018

  • 1000Genomes_data_indexes Public

    Forked from igsr/1000Genomes_data_indexes

    The index files for sequence and other data created for the 1000 Genomes project and the International Genome Sample Resource

    Apache License 2.0 Updated Mar 13, 2018

  • inheritance Public

    Forked from brentp/inheritance

    inheritance models for mendelian diseases

    Python MIT License Updated Mar 1, 2018

  • SV-plaudit Public

    Forked from jbelyeu/SV-plaudit

    Pipeline for structural variant image curation and analysis.

    Python 1 Updated Feb 7, 2018

  • mosdepth Public

    Forked from brentp/mosdepth

    fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing

    Nim MIT License Updated Jan 24, 2018

  • minima Public

    Forked from jekyll/minima

    Minima is a one-size-fits-all Jekyll theme for writers.

    CSS MIT License Updated Jan 5, 2018

  • PlotCritic Public

    Forked from jbelyeu/PlotCritic
    Python 1 Updated Oct 1, 2017

  • eihgpong Public

    EIGH Pong

    Shell Updated Aug 9, 2017

  • python-giggle Public

    Forked from brentp/python-giggle

    python (cython) wrapper for https://github.com/ryanlayer/giggle for fast interval searching of huge datasets.

    Python Apache License 2.0 Updated Jun 30, 2017

  • go-giggle Public

    Forked from brentp/go-giggle

    golang wrapper to giggle

    Go Apache License 2.0 Updated Jun 28, 2017