Change the default parameter

sandywang · Mar 22, 2017 · 13d57ee · 13d57ee
1 parent a860a10
commit 13d57ee
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Showing 2 changed files with 16 additions and 15 deletions.
diff --git a/GUI/gretna_GUI_NetAnalysisInterface.m b/GUI/gretna_GUI_NetAnalysisInterface.m
@@ -67,7 +67,7 @@ function gretna_GUI_NetAnalysisInterface_OpeningFcn(hObject, eventdata, handles,
     'Absolute'}};
 handles.Para.ThresType={1,...
     {'Network Sparsity';...
-    'Similarity Threshold'}};
+    'Value of Matrix Element'}};
 handles.Para.Thres={0.05:0.05:0.5};
 handles.Para.NetType={1,...
     {'Binary';...
@@ -107,12 +107,13 @@ function gretna_GUI_NetAnalysisInterface_OpeningFcn(hObject, eventdata, handles,
 %     'Nodal - Participant Coefficient', 8};
 % Init Postprocess Procedures
 handles.NodalModeCell={...
-    'Nodal - Community Index',         1;...
-    'Nodal - Participant Coefficient', 2;...
-    'Modular - Interaction',           3;...
-    'Nodal - Degree Centrality',       4;...
-    'Nodal - Betweenness Centrality',  5;...
-    'Nodal - Efficiency',              6};
+
+    'Nodal - Degree Centrality',       1;...
+    'Nodal - Betweenness Centrality',  2;...
+    'Nodal - Efficiency',              3;...
+    'Nodal - Community Index',         4;...
+    'Nodal - Participant Coefficient', 5;...
+    'Modular - Interaction',           6};
 
 handles.Para.CIndex={'<-X'};
 % Init Mode List Index
@@ -1263,13 +1264,13 @@ function UpdateConfigInterface(hObject)
 NameStr=[NameStr; {'Network Configuration'}];
 DataStr=[DataStr; {''}];
 
-NameStr=[NameStr; {' . Identify How to Manipulate the Sign of Matrix'}];
+NameStr=[NameStr; {' . Sign of Matrix'}];
 DataStr=[DataStr; {''}];    
 [tmp_name_str, tmp_data_str]=GenOptionalStr(Para.NetSign, ' . . Sign:  ');
 NameStr=[NameStr; tmp_name_str];
 DataStr=[DataStr; tmp_data_str];
 
-NameStr=[NameStr; {' . Identify the Method to Thresholding'}];
+NameStr=[NameStr; {' . Thresholding Method'}];
 DataStr=[DataStr; {''}];     
 [tmp_name_str, tmp_data_str]=GenOptionalStr(Para.ThresType, ' . . Method:  ');
 NameStr=[NameStr; tmp_name_str];
@@ -1284,13 +1285,13 @@ function UpdateConfigInterface(hObject)
 end
 DataStr=[DataStr; {tmp_data_str}]; 
 
-NameStr=[NameStr; {' . Identify Network Type'}];
+NameStr=[NameStr; {' . Network Type'}];
 DataStr=[DataStr; {''}];    
 [tmp_name_str, tmp_data_str]=GenOptionalStr(Para.NetType, ' . . Type:  ');
 NameStr=[NameStr; tmp_name_str];
 DataStr=[DataStr; tmp_data_str]; 
 if any(~cellfun(@isempty, strfind(Str, 'Global -')))
-    NameStr=[NameStr; {' . Generate Random Networks'}];
+    NameStr=[NameStr; {' . Random Network Generation'}];
     DataStr=[DataStr; {''}]; 
     NameStr=[NameStr; {' . . Random Network Number:  '}];  
     DataStr=[DataStr; {num2str(Para.RandNum{1})}]; 

diff --git a/GUI/gretna_GUI_PreprocessInterface.m b/GUI/gretna_GUI_PreprocessInterface.m
@@ -65,8 +65,8 @@ function gretna_GUI_PreprocessInterface_OpeningFcn(hObject, eventdata, handles,
     'Realign',                4;...
     'Normalize',              5;...
     'Spatially Smooth',       6;...
-    'Regress Out Covariates', 7;...    
-    'Temporally Detrend',     8;...
+    'Temporally Detrend',     7;...    
+    'Regress Out Covariates', 8;...
     'Temporally Filter',      9;...
     'Scrubbing',              10};
 
@@ -101,7 +101,7 @@ function gretna_GUI_PreprocessInterface_OpeningFcn(hObject, eventdata, handles,
     {'Register to first'; 'Register to mean'}};
 
 % Normalize
-handles.Para.NormSgy={3, ...
+handles.Para.NormSgy={1, ...
     {'EPI Template'; 'T1 Unified Segmentation'; 'DARTEL'}};
 
 handles.Para.SourPath={'Same To Fun', '', 'D'};
@@ -194,7 +194,7 @@ function gretna_GUI_PreprocessInterface_OpeningFcn(hObject, eventdata, handles,
 
 % DFC
 handles.Para.SWL={50};
-handles.Para.SWS={2};
+handles.Para.SWS={1};
 
 % Init Mode List Index
 handles.UnselPreInd=(1:10)';