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Commits on Jan 28, 2025

• Merge pull request #354 from sanger-tol/dev

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Commits on Jan 23, 2025

• Merge pull request #350 from sanger-tol/steps_flag_spelling

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Commits on Nov 25, 2024

• added bin file param

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• update containter

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Commits on Nov 21, 2024

• add binfile output and update pretext_graph

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• add binfile output and update pretext_graph

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• Merge pull request #336 from sanger-tol/tola401_updateresources

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• Merge pull request #333 from sanger-tol/dp24_module_update_samtools

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Commits on Jul 2, 2024

• Merge pull request #298 from sanger-tol/dp24_hotfix

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• Update base.config

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• Update ci.yml

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• changed server

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• change ubuntu

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• change ubuntu

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• change ubuntu

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Commits on Jun 29, 2024

• changed nf version

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• changed nf version

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• changed nextflow version

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• fixed linting error

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• Merge branch 'dp24_hotfix' into generate_csv_fix

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• sorting out read group probelm

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Commits on Jun 26, 2024

• add check_rg

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Commits on Apr 25, 2024

• modified minimap2 alignment run time

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• modified output bedfile name from minimap alignment

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Commits on Apr 4, 2024

• Update CHANGELOG.md

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Commits on Apr 3, 2024

• selfcomp fix and telomere output fix

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• selfcomp fix and telomere output fix

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• selfcomp fix and telomere output fix

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Commits on Mar 25, 2024

• Merge pull request #289 from sanger-tol/paf_coverage

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• test

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• test

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• test

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• test

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• test

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• change config

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