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Update add_rnaseq_analysis_descriptions.pl
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Removed "BWA" from the description and the display label of the bam file rnaseq analyses because other programs are used too.
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ens-carlos authored Oct 21, 2021
1 parent d00f889 commit 8403952
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions scripts/genebuild/add_rnaseq_analysis_descriptions.pl
Original file line number Diff line number Diff line change
Expand Up @@ -161,14 +161,14 @@ sub get_values {

my %description = (
'rnaseq_gene' => "Annotation generated from ".$sample_name." RNA-seq data",
'rnaseq_bam' => 'BWA alignments of '.$sample_name.' RNA-seq data. This BAM file can be downloaded from the <a href=\\"ftp://ftp.ensembl.org/pub/data_files/\\">Ensembl FTP site</a>',
'rnaseq_bam' => 'Alignments of '.$sample_name.' RNA-seq data. This BAM file can be downloaded from the <a href=\\"ftp://ftp.ensembl.org/pub/data_files/\\">Ensembl FTP site</a>',
'rnaseq_ise' => "Spliced-read support for ".$sample_name,
'rnaseq_daf' => "Spliced-read support for ".$sample_name,
);

my %display_label = (
'rnaseq_gene' => $sample_name." RNA-seq gene models",
'rnaseq_bam' => $sample_name." RNA-seq BWA alignments",
'rnaseq_bam' => $sample_name." RNA-seq alignments",
'rnaseq_ise' => $sample_name." intron-spanning reads",
'rnaseq_daf' => $sample_name." intron-spanning reads",
);
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