A set of tools to analyze and interpret auditory steady-state responses, particularly the subcortical kind commonly known as frequency-following responses (FFRs).

Fit Linear Models to BIDS Datasets

PyMARE: Python Meta-Analysis & Regression Engine

Praat in Python, the Pythonic way

An open-source application for the analysis and visualization of segmented vasculature datasets

A toolbox for comparing brain maps

Repository for the 2023 OHBM Hackathon

Pycortex is a python-based toolkit for surface visualization of fMRI data

Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes

QSMxT is an end-to-end software toolbox for Quantitative Susceptibility Mapping.

Brain Imaging Data Structure (BIDS) Specification

TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity

a pptx to markdown converter

A Tractography Tool for Diffusion MRI

Coordinate- and image-based meta-analysis in Python

The TemplateFlow Archive - A DataLad super-dataset

MNE: Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python

A toolbox for accurate single-trial estimates in fMRI time-series data

A fast medical imaging analysis library in Python with algorithms for registration, segmentation, and more.

Machine learning for NeuroImaging in Python

Automatic White Matter Bundle Segmentation

HDDM is a python module that implements Hierarchical Bayesian parameter estimation of Drift Diffusion Models (via PyMC).

Flexible DICOM conversion into structured directory layouts

FURY - Free Unified Rendering in pYthon.

Python library for Representational Similarity Analysis

niimath - a clone of fslmaths. Try the live demo:

fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.