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Pull requests list

Updating the definition of ambiguous mappers for paired-end
#62 by andrewdavidsmith was merged Oct 27, 2024 Loading…
Seem to have fixed simreads issue of rng not handling large enough values
#61 by andrewdavidsmith was merged Oct 27, 2024 Loading…
Update simulations for larger genomes
#60 by andrewdavidsmith was merged Oct 27, 2024 Loading…
Updates for new release
#58 by andrewdavidsmith was merged Oct 20, 2024 Loading…
Bugfix for configuring short mode
#56 by andrewdavidsmith was merged Jul 25, 2024 Loading…
Preventing attempts to use SSE instruction when not supported
#55 by andrewdavidsmith was merged Jun 8, 2024 Loading…
further optimization fixes
#54 by andrewdavidsmith was merged Jun 2, 2024 Loading…
version 3.2.3
#53 by andrewdavidsmith was merged Jun 1, 2024 Loading…
update alignment optimizations
#52 by andrewdavidsmith was merged Jun 1, 2024 Loading…
Removing original Makefiles
#51 by andrewdavidsmith was merged Apr 16, 2024 Loading…
Adding issue templates
#50 by andrewdavidsmith was merged Apr 7, 2024 Loading…
Fixing macos build script
#49 by andrewdavidsmith was merged Apr 7, 2024 Loading…
Option for better mapping of very short reads
#47 by andrewdavidsmith was merged Dec 10, 2023 Loading…
Update silence compiler warnigs
#45 by andrewdavidsmith was merged Oct 19, 2023 Loading…
updating smithlab_cpp submodule
#44 by andrewdavidsmith was merged Oct 19, 2023 Loading…
Preparing for v3.2.2 release
#43 by andrewdavidsmith was merged Oct 9, 2023 Loading…
Makefile.am: moving the parts of CXXFLAGS needed for building into AM_CXXFLAGS so users can replace the CXXFLAGS on the command line
#42 by andrewdavidsmith was merged Oct 8, 2023 Loading…
updating smithlab_cpp to latest
#41 by masarunakajima was merged Sep 21, 2023 Loading…
1
Updating submodule smithlab_cpp
#38 by andrewdavidsmith was closed Sep 12, 2023 Loading…
Compressed genome file
#37 by andrewdavidsmith was merged Sep 4, 2023 Loading…
Index target regions
#36 by andrewdavidsmith was merged Sep 4, 2023 Loading…
Update to C++17
#35 by andrewdavidsmith was merged Aug 20, 2023 Loading…
Updating bamxx submodule
#34 by andrewdavidsmith was merged Aug 9, 2023 Loading…
v3.2.1
#33 by andrewdavidsmith was merged Aug 5, 2023 Loading…
Version 3.2.0
#32 by andrewdavidsmith was merged Aug 5, 2023 Loading…
ProTip! Updated in the last three days: updated:>2025-01-08.