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Merge branch 'saskema-fix288' into devel #94

Merge branch 'saskema-fix288' into devel

Merge branch 'saskema-fix288' into devel #94

Triggered via push November 19, 2024 16:40
Status Failure
Total duration 33m 29s
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check-bioc.yml

on: push
Matrix: build-check
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1 error and 22 warnings
macOS-latest (devel)
Process completed with exit code 1.
macOS-latest (devel)
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/
ubuntu-latest (devel)
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/
windows-latest (devel)
Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/
macOS-latest (devel)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
macOS-latest (devel)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
macOS-latest (devel)
harfbuzz 10.0.1_1 is already installed and up-to-date. To reinstall 10.0.1_1, run: brew reinstall harfbuzz
macOS-latest (devel)
fribidi 1.0.16 is already installed and up-to-date. To reinstall 1.0.16, run: brew reinstall fribidi
macOS-latest (devel)
No files were found with the provided path: check. No artifacts will be uploaded.
macOS-latest (devel)
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
windows-latest (devel)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
windows-latest (devel)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/windows/contrib/4.5:
windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/windows/contrib/4.5:
windows-latest (devel)
file 'mzR/cleanup' did not have execute permissions: corrected
windows-latest (devel)
file 'mzR/configure' did not have execute permissions: corrected
windows-latest (devel)
Found the following significant warnings:
windows-latest (devel)
Non-portable flags in variable 'PKG_CPPFLAGS':
windows-latest (devel)
See below...
windows-latest (devel)
Non-portable flags in variable 'PKG_CPPFLAGS':
windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/windows/contrib/4.5:
ubuntu-latest (devel)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
ubuntu-latest (devel)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/