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Modern and easy to use SQL client for MySQL, Postgres, SQLite, SQL Server, and more. Linux, MacOS, and Windows.

TypeScript 17,299 1,121 Updated Feb 5, 2025

ExomeDepth R package for the detection of copy number variants in exomes and gene panels using high throughput DNA sequencing data.

C 69 27 Updated Sep 19, 2023

Regulatory Tables for Clinical Research

R 37 8 Updated Jul 25, 2024
R 4 Updated May 16, 2019

Collection of bioinformatics training materials

Python 999 184 Updated Feb 2, 2025

Copy Number Variation Detection In Next-generation sequencing Gene panels was designed for small (single-exon) copy number variation (CNV) detection in high coverage next-generation sequencing (NGS…

HTML 21 22 Updated Jun 30, 2020

Copy number calling and variant classification using targeted short read sequencing

R 132 32 Updated Jan 16, 2025
R 51 28 Updated Jan 11, 2023

CNV detection tool for targeted NGS panel data

R 16 9 Updated Feb 28, 2022

Copy number variant detection from targeted DNA sequencing

Python 569 168 Updated Jan 16, 2025

Clone of the Bioconductor repository for the scRNAseq package.

R 24 12 Updated Jan 18, 2025

Various algorithms for analysing genomics data

Java 205 60 Updated Feb 5, 2025

IMGT segment library converted to RepSeq.IO JSON format

Shell 13 5 Updated Mar 21, 2023

MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.

Kotlin 339 79 Updated Dec 25, 2024

GRIDSS: the Genomic Rearrangement IDentification Software Suite

Java 264 71 Updated Jan 10, 2024

A repo with random short code snippets

Jupyter Notebook 41 11 Updated May 27, 2019

Explore design matrices interactively with R/Shiny

R 37 2 Updated Dec 31, 2024

checkcites is a Lua script written for the sole purpose of detecting undefined/unused references from LaTeX auxiliary or bibliography files.

Lua 49 2 Updated Sep 16, 2022

Toolkit for processing sequences in FASTA/Q formats

C 1,421 307 Updated Aug 10, 2024