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add 31S3 example
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stashkov authored Jun 22, 2017
1 parent 98ec68b commit e351575
Showing 1 changed file with 117 additions and 0 deletions.
117 changes: 117 additions & 0 deletions examples.py
Original file line number Diff line number Diff line change
Expand Up @@ -76,6 +76,123 @@ def example30():
G.add_edge(17, 16, weight=0)

G.add_edge(18, 1, weight=1)
return G


def example32S3():
G = nx.DiGraph()
G.add_node(1, info='CD28')
G.add_node(2, info='CD4')
G.add_node(3, info='TCRlig')
G.add_node(4, info='CD45')
G.add_node(5, info='TCRb')
G.add_node(6, info='SHP1')
G.add_node(7, info='Csk')
G.add_node(8, info='PAG')
G.add_node(9, info='Lckp2')
G.add_node(10, info='CbIb')
G.add_node(11, info='Lckp1')
G.add_node(12, info='Fyn')
G.add_node(13, info='PI3K')
G.add_node(14, info='cCBIp1')
G.add_node(15, info='SHIP-1')
G.add_node(16, info='PIP3')
G.add_node(17, info='PDK1')
G.add_node(18, info='PTEN')
G.add_node(19, info='PKB')
G.add_node(20, info='TCRp')
G.add_node(21, info='SHP2')
G.add_node(22, info='ABI')
G.add_node(23, info='Rlk')
G.add_node(24, info='cCbIp2')
G.add_node(25, info='Gab2')
G.add_node(26, info='ZAP70')
G.add_node(27, info='Ca')
G.add_node(28, info='CaM')
G.add_node(29, info='CaMK4')
G.add_node(30, info='CaMK2')
G.add_node(31, info='cabin1')
G.add_node(32, info='AKAP79')
G.add_node(33, info='Calpr1')
G.add_node(34, info='LAT')
G.add_node(35, info='SLP76')
G.add_node(36, info='Itk')
G.add_node(37, info='IP3')
G.add_node(38, info='Calcln')
G.add_node(39, info='Vav1')
G.add_node(40, info='sh3pb2')
G.add_node(41, info='PLCgb')
G.add_node(42, info='PLCga')
G.add_node(43, info='DAG')
G.add_node(44, info='RasGRP1')
G.add_node(45, info='Vav3')
G.add_node(46, info='Grb2')
G.add_node(47, info='Sos')
G.add_node(48, info='GAPs')
G.add_node(49, info='PKCth')
G.add_node(50, info='Rac1p1')
G.add_node(51, info='Rac1p2')
G.add_node(52, info='HPK1')
G.add_node(53, info='Cdc42')
G.add_node(54, info='Ras')
G.add_node(55, info='Ikkg')
G.add_node(56, info='MLK3')
G.add_node(57, info='MEKK1')
G.add_node(58, info='Raf')
G.add_node(59, info='CARD11')
G.add_node(60, info='CARD11a')
G.add_node(61, info='Ikkab')
G.add_node(62, info='Gadd45')
G.add_node(63, info='MKK4')
G.add_node(64, info='MEK')
G.add_node(65, info='Bcl10')
G.add_node(66, info='Malt1')
G.add_node(67, info='IkB')
G.add_node(68, info='p38')
G.add_node(69, info='JNK')
G.add_node(70, info='ERK')
G.add_node(71, info='SRE')
G.add_node(72, info='Jun')
G.add_node(73, info='Fos')
G.add_node(74, info='Rsk')
G.add_node(75, info='AP1')
G.add_node(76, info='CREB')
G.add_node(77, info='CRE')

G.add_node(78, info='BAD')
G.add_node(79, info='GSK3')
G.add_node(80, info='NFkB')
G.add_node(81, info='NFAT')
G.add_node(82, info='bcat')
G.add_node(83, info='Cyc1')
G.add_node(84, info='p21c')
G.add_node(85, info='p27k')
G.add_node(86, info='FKHR')
G.add_node(87, info='BclXL')
G.add_node(88, info='p70S6K')

G.add_edge(1, 10, weight=1)
G.add_edge(1, 39, weight=0)
G.add_edge(1, 13, weight=0)

G.add_edge(2, 11, weight=0)

G.add_edge(3, 5, weight=0)

G.add_edge(4, 11, weight=0)
G.add_edge(4, 12, weight=0)

G.add_edge(5, 20, weight=0)
G.add_edge(5, 12, weight=0)
G.add_edge(5, 9, weight=0)
G.add_edge(5, 33, weight=0)
G.add_edge(5, 8, weight=1)






return G


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