R package: msqrob2

Implementation of the MSqRob analysis of differentially expressed proteins using the Features infrastructure

The msqrob2 package ports and modernises the method presented in MSqRob and MSqRobSum to use the QFeatures class infrastructure.

Installation

To install the current version of msqrob2, run.

if(!requireNamespace("BiocManager", quietly = TRUE)) {
 install.packages("BiocManager")
}
BiocManager::install("statOmics/msqrob2")

The dependencies of the package are listed in the DESCRIPTION file of the package.

Issues and bug reports

Please use https://github.com/statOmics/msqrob2/issues to submit issues, bug reports, and comments.

Usage

See vignettes on msqrob2Examples