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@qbicsoftware @vgteam @graph-genome @pangenome

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  1. nf-core/pangenome nf-core/pangenome Public

    Renders a collection of sequences into a pangenome graph. https://doi.org/10.1093/bioinformatics/btae609.

    Nextflow 78 16

  2. pangenome/odgi pangenome/odgi Public

    Optimized Dynamic Genome/Graph Implementation: understanding pangenome graphs

    C++ 198 41

  3. pangenome/pggb pangenome/pggb Public

    the pangenome graph builder

    Shell 403 44

  4. pangenome/smoothxg pangenome/smoothxg Public

    linearize and simplify variation graphs using blocked partial order alignment

    C++ 57 7

  5. pangenome/pgge pangenome/pgge Public

    the pangenome graph evaluator

    Shell 23 2

  6. qbicsoftware/QMSFC qbicsoftware/QMSFC Public

    Data and code for the `Multiomics surface receptor profiling of the NCI-60 tumor cell panel uncovers novel theranostics for cancer immunotherapy` paper.

    R 1 2