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disambiguate.md

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Name URL Description
Disambiguate
Disambiguation algorithm for reads aligned to two species (e.g. human and mouse genomes) from Tophat, Hisat2, STAR or BWA mem.

Disambiguation algorithm for reads aligned to two species (e.g. human and mouse genomes) from Tophat, Hisat2, STAR or BWA mem. Both a Python and C++ implementation are offered.

The MultiQC module for Disambiguate parses the summary files generated by Disambiguate.