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This is used to call Codeml to calculate the positive selection of gene in Branch-Sites Model.(Require codon sequence)
The Bluesky Social application for Web, iOS, and Android
Analysis of Gene Expression Project - Minor Bioinformatics
🗺 A purely front-end development navigation
⭐ Linux / Windows / macOS 跨平台 V2Ray 客户端 | 支持 VMess / VLESS / SSR / Trojan / Trojan-Go / NaiveProxy / HTTP / HTTPS / SOCKS5 | 使用 C++ / Qt 开发 | 可拓展插件式设计 ⭐
Qt based cross-platform GUI proxy configuration manager (backend: sing-box)
Tutorials on phylogenomic analyses for the ForBio Phylogenomics course
A collection of tools for Multiple Alignments of DNA, RNA, Protein Sequence
A copy version from http://www.bork.embl.de/pal2nal/, thanks Mikita Suyama for send it to me for writing a bioconda recipe
Posterior summarisation in Bayesian phylogenetics
Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, enabling assessment of downstream analyses such as trees and …
A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0
A Windows Graphical Platform for Batch Manipulation of Tremendous Amount of Sequence Data
A tool for plotting CAFE5 gene family expansion/contraction result
Scripts associated with the sequencing, annotation and assembly of the Malabar grouper genome, and the analysis of the developmental transcriptome from day 1 to juvenile fish.
This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MACSE. These pipelines are mostly bash scripts encapsulated wi…
Gaius-Augustus / TSEBRA
Forked from LarsGab/TSEBRATSEBRA: Transcript Selector for BRAKER