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Update to latest GitHub Actions workflows
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Fixes #225
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jimhester committed Sep 27, 2021
1 parent ee2c32e commit e153c8b
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81 changes: 35 additions & 46 deletions .github/workflows/R-CMD-check.yaml
Original file line number Diff line number Diff line change
@@ -1,10 +1,14 @@
# Workflow derived from https://github.com/r-lib/actions/tree/master/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
#
# NOTE: This workflow is overkill for most R packages and
# check-standard.yaml is likely a better choice.
# usethis::use_github_action("check-standard") will install it.
on:
push:
branches:
- master
branches: [main, master]
pull_request:
branches:
- master
branches: [main, master]

name: R-CMD-check

Expand All @@ -18,64 +22,49 @@ jobs:
fail-fast: false
matrix:
config:
- {os: macOS-latest, r: 'release'}

- {os: windows-latest, r: 'release'}
# Use 3.6 to trigger usage of RTools35
- {os: windows-latest, r: '3.6'}
- {os: macOS-latest, r: '3.6'}
- {os: macOS-latest, r: 'devel'}
- {os: ubuntu-16.04, r: '3.2', rspm: "https://demo.rstudiopm.com/all/__linux__/xenial/latest"}
- {os: ubuntu-16.04, r: '3.3', rspm: "https://demo.rstudiopm.com/all/__linux__/xenial/latest"}
- {os: ubuntu-16.04, r: '3.4', rspm: "https://demo.rstudiopm.com/all/__linux__/xenial/latest"}
- {os: ubuntu-16.04, r: '3.5', rspm: "https://demo.rstudiopm.com/all/__linux__/xenial/latest"}
- {os: ubuntu-16.04, r: '3.6', rspm: "https://demo.rstudiopm.com/all/__linux__/xenial/latest"}

# Use older ubuntu to maximise backward compatibility
- {os: ubuntu-18.04, r: 'devel', http-user-agent: 'release'}
- {os: ubuntu-18.04, r: 'release'}
- {os: ubuntu-18.04, r: 'oldrel-1'}
- {os: ubuntu-18.04, r: 'oldrel-2'}
- {os: ubuntu-18.04, r: 'oldrel-3'}
- {os: ubuntu-18.04, r: 'oldrel-4'}

env:
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
RSPM: ${{ matrix.config.rspm }}
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KEEP_PKG_SOURCE: yes

steps:
- uses: actions/checkout@v2

- uses: r-lib/actions/setup-r@master
- uses: r-lib/actions/setup-pandoc@v1

- uses: r-lib/actions/setup-r@v1
with:
r-version: ${{ matrix.config.r }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true

- uses: r-lib/actions/setup-pandoc@master

- name: Query dependencies
run: |
install.packages('remotes')
saveRDS(remotes::dev_package_deps(dependencies = TRUE), "depends.Rds", version = 2)
shell: Rscript {0}

- name: Cache R packages
if: runner.os != 'Windows'
uses: actions/cache@v1
- uses: r-lib/actions/setup-r-dependencies@v1
with:
path: ${{ env.R_LIBS_USER }}
key: ${{ runner.os }}-r-${{ matrix.config.r }}-${{ hashFiles('depends.Rds') }}
restore-keys: ${{ runner.os }}-r-${{ matrix.config.r }}-

- name: Install system dependencies
if: runner.os == 'Linux'
env:
RHUB_PLATFORM: linux-x86_64-ubuntu-gcc
run: |
Rscript -e "remotes::install_github('r-hub/sysreqs')"
sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))")
sudo -s eval "$sysreqs"
extra-packages: rcmdcheck

- name: Install dependencies
run: |
remotes::install_deps(dependencies = TRUE)
remotes::install_cran("rcmdcheck")
shell: Rscript {0}
- uses: r-lib/actions/check-r-package@v1

- name: Check
run: rcmdcheck::rcmdcheck(args = "--no-manual", error_on = "warning", check_dir = "check")
shell: Rscript {0}
- name: Show testthat output
if: always()
run: find check -name 'testthat.Rout*' -exec cat '{}' \; || true
shell: bash

- name: Upload check results
if: failure()
uses: actions/upload-artifact@master
uses: actions/upload-artifact@main
with:
name: ${{ runner.os }}-r${{ matrix.config.r }}-results
path: check
46 changes: 18 additions & 28 deletions .github/workflows/pkgdown.yaml
Original file line number Diff line number Diff line change
@@ -1,43 +1,33 @@
# Workflow derived from https://github.com/r-lib/actions/tree/master/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: master
branches: [main, master]
tags: ['*']

name: pkgdown

jobs:
pkgdown:
runs-on: macOS-latest
runs-on: ubuntu-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v2

- uses: r-lib/actions/setup-r@master
- uses: r-lib/actions/setup-pandoc@v1

- uses: r-lib/actions/setup-pandoc@master

- name: Query dependencies
run: |
install.packages('remotes')
saveRDS(remotes::dev_package_deps(dependencies = TRUE), "depends.Rds", version = 2)
shell: Rscript {0}

- name: Cache R packages
uses: actions/cache@v1
- uses: r-lib/actions/setup-r@v1
with:
path: ${{ env.R_LIBS_USER }}
key: macOS-r-3.6-${{ hashFiles('depends.Rds') }}
restore-keys: macOS-r-3.6-
use-public-rspm: true

- name: Install dependencies
run: |
install.packages("remotes")
remotes::install_deps(dependencies = TRUE)
remotes::install_dev("pkgdown")
remotes::install_github("tidyverse/tidytemplate")
shell: Rscript {0}

- name: Install package
run: R CMD INSTALL .
- uses: r-lib/actions/setup-r-dependencies@v1
with:
extra-packages: pkgdown
needs: website

- name: Deploy package
run: pkgdown::deploy_to_branch(new_process = FALSE)
shell: Rscript {0}
run: |
git config --local user.name "$GITHUB_ACTOR"
git config --local user.email "[email protected]"
Rscript -e 'pkgdown::deploy_to_branch(new_process = FALSE)'
53 changes: 38 additions & 15 deletions .github/workflows/pr-commands.yaml
Original file line number Diff line number Diff line change
@@ -1,52 +1,75 @@
# Workflow derived from https://github.com/r-lib/actions/tree/master/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
issue_comment:
types: [created]

name: Commands

jobs:
document:
if: startsWith(github.event.comment.body, '/document')
name: document
runs-on: macOS-latest
runs-on: ubuntu-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v2
- uses: r-lib/actions/pr-fetch@master

- uses: r-lib/actions/pr-fetch@v1
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}
- uses: r-lib/actions/setup-r@master
- name: Install dependencies
run: Rscript -e 'install.packages(c("remotes", "roxygen2"))' -e 'remotes::install_deps(dependencies = TRUE)'

- uses: r-lib/actions/setup-r@v1
with:
use-public-rspm: true

- uses: r-lib/actions/setup-r-dependencies@v1
with:
extra-packages: roxygen2

- name: Document
run: Rscript -e 'roxygen2::roxygenise()'

- name: commit
run: |
git config --local user.name "$GITHUB_ACTOR"
git config --local user.email "[email protected]"
git add man/\* NAMESPACE
git commit -m 'Document'
- uses: r-lib/actions/pr-push@master
- uses: r-lib/actions/pr-push@v1
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}

style:
if: startsWith(github.event.comment.body, '/style')
name: style
runs-on: macOS-latest
runs-on: ubuntu-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v2
- uses: r-lib/actions/pr-fetch@master

- uses: r-lib/actions/pr-fetch@v1
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}
- uses: r-lib/actions/setup-r@master

- uses: r-lib/actions/setup-r@v1

- name: Install dependencies
run: Rscript -e 'install.packages("styler")'

- name: Style
run: Rscript -e 'styler::style_pkg()'

- name: commit
run: |
git config --local user.name "$GITHUB_ACTOR"
git config --local user.email "[email protected]"
git add \*.R
git commit -m 'Style'
- uses: r-lib/actions/pr-push@master
- uses: r-lib/actions/pr-push@v1
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}
# A mock job just to ensure we have a successful build status
finish:
runs-on: ubuntu-latest
steps:
- run: true
39 changes: 13 additions & 26 deletions .github/workflows/test-coverage.yaml
Original file line number Diff line number Diff line change
@@ -1,42 +1,29 @@
# Workflow derived from https://github.com/r-lib/actions/tree/master/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches:
- master
branches: [main, master]
pull_request:
branches:
- master
branches: [main, master]

name: test-coverage

jobs:
test-coverage:
runs-on: macOS-latest
runs-on: ubuntu-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}

steps:
- uses: actions/checkout@v2

- uses: r-lib/actions/setup-r@master

- uses: r-lib/actions/setup-pandoc@master

- name: Query dependencies
run: |
install.packages('remotes')
saveRDS(remotes::dev_package_deps(dependencies = TRUE), "depends.Rds", version = 2)
shell: Rscript {0}

- name: Cache R packages
uses: actions/cache@v1
- uses: r-lib/actions/setup-r@v1
with:
path: ${{ env.R_LIBS_USER }}
key: macOS-r-3.6-${{ hashFiles('depends.Rds') }}
restore-keys: macOS-r-3.6-
use-public-rspm: true

- name: Install dependencies
run: |
install.packages(c("remotes"))
remotes::install_deps(dependencies = TRUE)
remotes::install_cran("covr")
shell: Rscript {0}
- uses: r-lib/actions/setup-r-dependencies@v1
with:
extra-packages: covr

- name: Test coverage
run: covr::codecov()
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