bwa-mem2

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BWA-MEME: Faster BWA-MEM2 using learned-index

A pipeline to investigate horizontal gene transfer from NGS data

taxonomies workflow pipeline nextflow ngs tidyverse multiqc samtools bwa-mem horizontal-gene-transfer genomics-visualization fastqc nf-core krona kraken2 bwa-mem2 ggbio

Highly optimized Burrow-Wheeler Aligner specifically for Illumina ~150 bp short-read alignment.

smith-waterman bwa sequence-alignment fm-index bwa-mem2

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