Parse multiple Antimicrobial Resistance Analysis Reports into a common data structure

The Harmony Python library: a research tool for psychologists to harmonise data and questionnaire items. Open source.

A python framework for microbial natural products data mining by integrating genomics and metabolomics data

Python implementation of Combat for data harmonisation, allowing also to remove unwanted effects

A Python toolkit for biomedical data integration and harmonization

This is the DataHarmonizer spreadsheet web application bundled with pathogen genomics data entry and validation templates

Self-hostable, open-source engine for reproducible data harmonization, dataset building & exploration

Code and sample data for McGregor et al., 2024

Python library for intelligent data stewardship using Large Language Model (LLM) embeddings

AD & PD cohort variable distributions

Intelligent data steward toolbox using Large Language Model embeddings for automated Data-Harmonization

International Physical Activity Questionnaire (IPAQ) variables

Example Jupyter notebook and R scripts using Harmony in real research problems

Visualizing demographic evolution using geographically inconsistent census data

This is the source code for the Harmony project REST API

A lightweight R script for text mining and harmonizing medical phenotype data. Cleans, standardizes, and maps diagnoses to ICD-10 codes, with clinical annotations for enhanced data usability.

Miscellaneous codes for spatial mapping and raster data manipulation