Technology-invariant pipeline for spatial omics analysis that scales to millions of cells (Xenium / Visium HD / MERSCOPE / CosMx / PhenoCycler / MACSima / etc)
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Updated
Dec 2, 2024 - Python
Technology-invariant pipeline for spatial omics analysis that scales to millions of cells (Xenium / Visium HD / MERSCOPE / CosMx / PhenoCycler / MACSima / etc)
GeoTile is the python library for tiling the geographic raster data (eg. Tiff etc)
This is a R toolkit and developer version package to estimate multidimensional aspects of greenness and nature exposure, such as availability, accessibility and visibility using various geospatial data and models
Interoperability between SpatialData and the Xenium Explorer
Download and Convert METASPACE datasets to common formats such as AnnData or SpatialData
Xarray powered multidimensional-image analysis toolkit.
Geospatial Ontology to support the Documentation of Minor Historical Centres
Live births in Scotland 2021 - Exercise on spatial vector data with R - RMarkdown file
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