scikit-bio-tutorials

Interactive tutorials for using scikit-bio in biological research.

This repository hosts tutorial materials for the ISMB 2024 conference.

• https://www.iscb.org/ismb2024/programme-schedule/tutorials#ip3

The tutorial is broken down as follows, Google Colab notebooks can be launched via the following links

1. Section 01: Basic bioinformatics using scikit-bio
2. Section 02: Embeddings and Vectors with Scikit-Bio
3. Section 03: Working with various omic data types
4. Section 04: Analyzing microbial communities
5. Section 05: Comparing microbial community structure
6. Section 06: Inferring and associating critical features
7. Section 07: Predicting host and environmental traits