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fix: repair incorrect and missing data
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* Fix many manual data entry mistakes.
* Add some new viruses and isolates.
* Format JSON.
* Make some segment names consistent.
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igboyes authored Nov 27, 2024
1 parent c1bb064 commit f022391
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3 changes: 1 addition & 2 deletions .gitignore
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.idea
.cache
.migration_cache
.idea
2 changes: 1 addition & 1 deletion src/a/abutilon_brazil_virus/un404hxp/isolate.json
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{
"id": "un404hxp",
"source_type": "genbank",
"source_type": "refseq",
"source_name": "NC_014138",
"default": true
}
13 changes: 13 additions & 0 deletions src/a/achyranthes_bidentata_mosaic_virus/otu.json
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{
"_id": "aNPsLwhJ",
"name": "Achyranthes bidentata mosaic virus",
"abbreviation": "",
"schema": [
{
"molecule": "ssRNA+",
"name": "Genome",
"required": true
}
],
"taxid": 2793794
}
9 changes: 9 additions & 0 deletions src/a/achyranthes_bidentata_mosaic_virus/ycd/hfsHnaa2.json
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{
"_id": "hfsHnaa2",
"accession": "MT648692.1",
"definition": "Achyranthes bidentata mosaic virus isolate Zhejiang, complete genome",
"host": "Achyranthes bidentata",
"segment": "Genome",
"sequence": "AACAAAATTTATGCAAAAACGATTCAAATCAGCTGAACATTCACAATCGCAAGAACGCACAATTACAACTCCGATACAGAAATTTAAACAGCAAACAAATTTACAATGGCAATGATGATGTTTGGACAATTCGTTAGCAACCTTCCACTAGCAAACAATGTGAGTATGGGTGGGACTTGTTCGATTGGGACACCATGCAACATCACCAAGCAAGCGACGCATATCGCATTTGAAGCGAAGCAGTCGGCTCTCGACAGGTTGCAAGCCTTCTTTGATACACCAGAGATGGTTGCAAAGATGCGCGCGCACAAATACGCCACAACAAAAACAAGGAGCAACGGCACCATTTACTTGAAGTATGAGAAGGAGAGTGTCGTGAGGAGGCGTGAGAAGCATGACGAAGTGCTTGCAAAGTTCGACCAGGATTTCAAGGCAGGGAGTTTTGAAGTCGTGTCTCAGCTGGAGCCACGAATTGAGACAGTGGTTACACAACCACTAACAAAAATCGATCTGAAGTCATCACACTGGAAACGCACACCCAAGCAACCAAAGAGACACTTAAAGAAATTGAAGTTTTCTATGCGTGTGAAGTGCGATGTGAGCACTTTGGAAAAGAAGATGATGTGCATCGCAGGGAAAAAGGGAATGCATGTGGAATTCATTGGAAAACGCAGGCACAAGCTGGAAGCTAACTACAAAAGGATTAGTGGATCCACTATTCCGTGTATTACGCTACCGCACGAAATGGGGTTGAGAAAGCGCAAAGAGTTACCCACGCGCGTTTATACAAAGGAAATAAGAACGCTGGAATTCGGAAGGCGCATTCGACACTCTTTTCATGATAAGGACATCACATTTGGGTGGAGCGGTGCAATACTCCCGAATTCAATGGTGAATCGATTTAGCAGACACGACAATTTTGTTGTTCGTGGAAGATTGTATGGCCAACTCATAGATGCGAGGGCAGCCATTTCATATCACTCAACTCTTGCTATAGCCCAATACAGTTTCAAAAATGAGTTCTGGGATGGATGGAAAACGGCATTCGACAATTTAAAGCCTCAAGATGCTTCTCACACTTGTGAACCAGATTTAAGCAACGCCCAATGTGGAAACTTGGCAGCTTTATTTGTGCAGATGGTGCACCCTTGCGTGAAACTGTCTTGTAAAACTTGTAGGAGTGCTATAGCAGACCTTGATTATAAAGGACTAGTCAATATGATCGACAAACAAATGTCTGAGCACGAAGGCAAGATTGGCGAAATCTCGGACAGATGCCCTTCGGTGGCCAATGTCTTAACCTTTTTAGGTAGGAAGCCAATGGCAAACTCGAATTTGAACGATTCAATGGAGATTGTTCGTCTCTTACAAGGTAAGAAGGCCAACCAGCTTCAGCAAATTTTGCGCATCAATGAGATTCTGGCAAAGGGACACCTCAGCTCACACAGCGAAATGCACGAAGCAATGAATAAGCTGTTGGAAATTGCACGTTGGTTTCATAATCACCTCAGCTTGGTCAATGCAGGTGCTCTTGAGACGTTTCGTAACAAAATCGCCTCAAAAGCACTCATCAACCCAACTCTCATGTGCGATAATCAATTGGATCGCAATGGGAACTTTGTGTGGGGAGAGAGAGGAAGACATTCAAAGAGATTCTTTGCAAACTTCTTTGAAGTTGTGGAACCAGGTGATGGGTACCGTAAACATGTGATGAGAAAGCACCCAAATGGAGTGCGTAAATTAGCAATTCAAAATTTGATAGTACCCTTGTCACTGGACAGAGCACGAGCATCATTCAAGGGTGAACCAATTAATCCACAACCTTTGACAGAAGCATGCGTGAGTAGGCTGGATGGATCATTTGTACACACATGTTGTTGTGTCACGGATGATATTGGCAAACCATTGCTATCAACACTTAAGAGCCCCACCAAGAGCCACTTAGTCGTTGGATCAACTACGAATGCCAAATACATAGATTTACCACAAATCGAGGAAAGCAAGATGTACATAGCAAAGGAAGGTTATTGTTATCTTAACATATTCCTCGCAATGCTTGTGAACATCAATGAAGAAAATGCCAAGGATTTTACAAAGCGAGTGCGTGACATAATGATACCAAAACTAGGTATTTGGCCCAGCATGATTGATGTTGCAACGGTTTGTTATATGCTTGCAATTTTCTATCCAGAGGTTCGCAATGCTGAATTACCAAGCATTCTGGTTGATCACGAAAGCCAAACGATGCATGTCATTGATTCATTCGGATCCACAACAACCGGGTATCACATCCTTAAAGCAGGGACAGTGCAGCACCTTATAAACTTTGCTTCTGACGAATTAAACAGTGATATGAAGCATTATGCAGTTGGGGGTCAAGAGCCGCCGTCACAGGCATTAAGGATGGAGCTAGCCCTAATTAAGAGCATCTTCAAGCCGAAGGAATTAGTGACAATTATTCAGGAGGATCCCTACATACTGATGATGAGTCTAATGTCGCCGAGATTGCTAATGAGTTTGTATAATGTCGGGGGTCTTGAGATAGCGATGCGCGAGTGGATAACCAAGGACTTTCAAGTGAGCTCAATATTCTCAATTTTAACTGAATTAGCGCAAAGGATCTCAGTGGCGGACATCCTAGCAGAGCAATTCGCTGTAATAACTAGTAAAACTGATCAAATATTAGAATTGCTCGCTGCTTCAAAACATGATACAGAGAATAAACGAGAAATACAACAGGTCTGTAGAGTTGTGGCAGCACGCACATACAGTGACCGTCATCTCGAGGAGAATGGTTTTACAACCATGATGATGCCCGTTTACATTTTGCAAGAAAAAATGTATGGGGAAAGATTAGACGAAGCTTGGTCCGGGCTCAGTTGGTTGGAAAAATTCTCGCAAATACGGCATTCCAGAAAAGTGCGTCATTATATTATAGAACCTTTGCCAATCACAAGGAGCGGAGATTCCAGCGTCAATTGTCAAGACTGGCGCATTTGGTTACGTGGCAAAATGAAGCGTCTGTACACTGGAGCACAAGATACGAGAAAAAGAGCACAAAATAAAATGTACAAGATAGCAACCCAGACGGTAGGGAAATCAATACTCTATATTTTCAGGCGTTGTTATTCGGATATATTTTACTTTGTAAATGTGCTAATTGTATGCAATGTGTTGTTTAGCATGGCATATACTCTACAAAAGATGTTGCAAGAGGCGCAGCTCAATAAAAGGAAAATCAAGGTCATTGAGTATCAAGAGAAGTCAGAGATGCTTGAGAATTTGTACAAACATTGTAAGCTCGCCAATCAAGGCGACCCCACGAAGCAAGAATTCTTGGAGCAGGTAGAAAAAGTTAATAAAGACTTGGTTCCGTTCGCACAAGCACAACTCGATGAAGACACCGACACAGTGAGTTATCAATCAAAGACAGCCACAGAGTTACACCTCGAAAAGGTGGTAGCTGTAATGGCTTTGTTTACGATGATAATCGATCCAGCAAAGAGTGATGCCGTGTTTAGAGTCTTATCTAAGGTAAAAACATTCTTTGGCACAATCGAGGACACAGTGCGGTATCAAAGTCTTGATGAGATCCAGGACACAATTGAGGATAAAAAGCTCACAATAGACTTTGAACTTGATACTAGCACTGAAGGCGCACAGGCAACAATGGACGTGCGATTCGAGGATTGGTGGCACAAGCAGCTTGAACAAAATAGAGTGGTTCCGCACTATCGCCTGAGTGGTAGTTTCATGGAGTTCACGAGACAAACAGCAGCATCTGTAGCCAACAGTATAGCAACAGCCACTCAGACTGAGTTCTTGATAAGAGGAGCAGTTGGCTCAGGGAAGTCAACAGGCTTGCCACACCAGTTAAGCATGAAAGGAAAAGTGCTACTACTAGAGCCCACAAGACCGTTGGCAGAAAATGTATGCAAGCAACTTAGAGGAGATCCATTTTACTTGCAACCAACGCTGCGGATGCGTGGCCTGAGCACATTTGGATCATCGAACATTTCAGTCATGACAGGAGGTTTTGCATTACATTATTATGCGCACAACCCCGCAATGCTAAATGATTTTGATTTCATAATCATCGATGAATGCCACACGCTGGACGCACCAACAATGGCTTTTTATTGCTTGCTAAGGGAATTCTCGTTCCCTGGGAAAGTATTGAAAGTTTCAGCAACACCACCAGGAAAAGAGTGTGAATTCCGAACACAATATGACGTCCAAATCAAGAAGGAGGACGCTATTTCATTCCAGAGTTTTGTTCAAGCTCAAGGAACTGGATCAAACGCGGATGTTGTCATGCACGGAAACAATATACTTGTTTACGTGGCAAGTTACAATGATGTGGATCAATTGAGTGACCTGCTAACGAAGGCAAACCATAAAGTCACGAAGGTGGATGGGCGGACCATGAAGATGGGGCACGTTGAAATTCCAACAAAAGGTACTGCACAATGCAAGCACTTCGTAGTTGCAACAAATATCATTGAGAATGGAGTTACTCTGGACATTGATGTTGTTGTTGATTTCGGTCAGAAAGTGGTTGCTGAACTTGATATCGATGACAGATGCATGCGATACAAAAAGGTTGCCATCAGCTATGGGGAGCGCATACAACGACTTGGCAGAGTTGGTCGTGTTAAAACTGGAGTCGCATTGAGAATTGGTCATACAGAGCAAGGGCTTGTCGACATACCGGTGTCCATTGCAACTGAAGCAGCTTTCCTATGCTTCGCATATGGACTCCCTGTTATGACACATAACGTTACAACGAGTCTGCTCAATAACTGCACAACAAACAAGGCAAAAACTATGATGCAGTTCGAACTCTCTCCTTTCTTCACAGCCGACCTTGTTAATTTTAGAGGAGCAATGCACCCAGCAATACACACACTTTTAAAACCGTTCAAATTACGAGAATCGGAAGTGGAGTTGAACACATTGGCTATACCAAATGCGTGTATTAATCAATGGTTGTCCATAGCAAGCTATGAGAAAATCGGTATTAAGATCAACGCATCAAAAGACGTAAGAATTCCATTCTATGCGCGTGGGATACCAGATAAGCTGTTTGAACAGCTATGGACGGCACTTAATGATTATAAGCACGACGCGAACTTTGGCAAGCTCACAAGTGCATGTGCCACGAAGGTTGCGTACACGCTTAGCACAGAGCCGAGCGCAATCCCTCGCACAATAGCCATTATTGATCAACTGACTACTGAGGAGAGGCAGAAGAAGGCACATTTTGAAGCACTATCAACGAACGTTTGCTCACACAAGTTCACTCTGAGAGGCATTGTAGATACAATCCGAGCTCGATATATGACAGATCATTCAAAAGCGAACATTGAGCGTTTGCAGCAAGCTCGCTCTCAGTTATTGAACTTTAGCACAACACACCATGATTTTTCAAAAGTCTCATCACTCCTCAGTTACGGATACCTTGAAACGGTGCAGTACCAGAGCAAGGATGAAATCAGTAAAACACTTCAACTCAAAGGGCGCTGGAATGGTTCACTTCTGACACAGGATTTGGCTATTTCAGGCATGGTTCTAGTTGGGGGCGTTTGGATGGCGTGGGAACACTTCAAAAACTCAAGCGCTGATGTTGTAGTGTATCAATCAAAGAGGAAACTCCAAAAACTTAAATTTCGTGACGCTCGCGATAGAAAAGTTGGACGAGAAGTTTACTCTGACGATGGCACCATTGAGCACCATTTTGGAGCTGCGTACACAGCGCGGGGAAAGGTTAAAGGCAATCATGCAACAAAAGGATTAGGAAAGAAGTCACGAAATTTCGTGCACATGTATGGATTCGATCCTGCTGAATACTCTTTCATACGGTTTCTCGATCCTCTCACCGGAGCCACATTGGACGAACCAACAACGTGTGATGTATCGTTGGTTCAGAGCGAATTTGGGGCAATACGTCAAGACAAGGCATCAGAGGATGATGATTTTAATCAAAGAGTTCGAATCAATCCTGGAATCGAGGCATACTTTCTAAACTCGAAAGCCCAGAGAGCATTAAAGGTGGATTTAACTCCACACAATCCGCTTGCGGTAGGAGGCAAATCAGCATCAATTGCTGGGTACCCTGAGCGCGAATTTGAATTGCGGCAAACTGGTCCAGCAGTAGTAGTGCCATACAAGGCGGTCCCTGAGAAGAACGAAATCGATCTGGTCTCCATGGAGGGGAAATCGGTTCACAAAGGACTGAGGAATTATAATCCGATAGCAGTTGCAGTTTGCAAGCTCAGCAACGACTCAGATGGTGTTACAACGAGTATGTATGGTATTGGGTATGGATCGGTCATTATTTCCAATGGTCACCTATTTAGGAGAAACAATGGCACTTTAAAAATTCAATCTCACCATGGAGTGTTCACAGTACCGAATACAGCAAAGCTGGAGATGCATCATATTGAAGGGAAGGATATGGTTGTGATTCGCATGCCAAAGGATTTCCCTCCATTCCCGATGAAAGTCAGGTTTAGAGCACCAATTAAAGGCGAGAAATCTTGTTTAGTAGGGTCTCTGTTCCAGCAACGTAGCATCTCAAGTGTGGTTTCAGAGTCAACGGTTGTATCTCCATCTAGCGGCGGCAGCTATTGGCAGCACTGGGTGTCGACGAAGAATGGTGATTGCGGACTTCCAATCGTATCGATATCAGATGGTGTCATTACGGGCGTTCATGGACTAGAAAGCACTGTGACAAAGAGAAACTATTTTGTGCCATTCACTGATGATTTTGCAGAACGAGTGCTGGAGAAGCTAGATTTAATTGAATGGCAGAAGCATTGGTTGCACACAGTTGATAAAGTTAGCTGGGGTGGACTACAACTCAAAGCATCCGAGCCTGAAGCAATCTTTCGAGCATCAAAAATAATCTCCGATCTTCGGGATGAGGAGATTGATTTTGTTTGTGAGCAGGCAGACCAAGTTAGATGGGTACAAGAGAGTTTGCGGGACAATCTCAAAGCAGTTGCTCGAGCTCCGAGTCAGCTTGTTACAAAGCATGTTATTAAGGGTGAATGCAGCCAGTTTGTTGAGTATCTGGCGCAGAATGAGGAGGCTCGTGAGTTTTTCATTCCTTTGATGGGAGAATACAAGCCAAGCAAGTTGAACAAGGAAGCGTATAATAAGGATTTTCTTAAATACGCTGATCCGATAACAGTAGGAGTAGTTGAACCTTACACTTTCCGCACAGCAATAGCATCTGTGATCACGTTACTGGAATCAATTGGCTTCACGGAGTGCAAGTACATAACGGACACGGATAGCATAATATCATCATTGAATATGAAGGCAGCTGTTGGTGCCTTGTATAGCGGAAAGAAGAATGACTACTTCCTCGGCGTAACTGATGAAGGCAAGGATCAATTGCTGCTTGCAAGCTGCAAGAGGCTCTTCTTGGGACAGAAAGGGGTGTGGAATGGCTCGCTCAAAGCTGAATTGCGTCCAGTGGAGAAAGTCAGCCAGAACAAAACTCGCACATTCACAGCAGCACCGTTGGAAACGCTCTTGGGTGCCAAAGTCTGTGTTGACGATTTCAATAATCAGTTTTATTCACTAAACTTACATGGCCCGTGGACTGTAGGCATGACTAAGTTTTATAGTGGGTGGGATACATTATTGAGAAAATTACCAGATGGGTGGTTATATTGCCATGCAGACGGCTCGCGTTTTGATAGCTCTTTAACCCCGTATCTTATCAATGCAGTGATTGAAGTGCGCCAAGCGTTCATGGAAGAGTGGGAGTGTGGACTCACCATGCTGAAAAATTTGTACACAGAGATCATTTACACACCCATTCTAACACCTGATGGAACAATTGTGAAGAAGTTCAAAGGGAATAATAGTGGGCAGCCTTCAACAGTGGTTGATAACACTCTTATGGTAATCATAACAATGTACTACTCATTACACCGTTGTGGATGGGATGCTAAAATGATACATGAGAATTTTGTATTCTTTGCGAATGGGGATGACCTTATCATAGCAGTGGATCCACAACAACAAGCTGTATTAGACACACTGCAAGCTTCTTTTCATGAGCTGGGGCTCAGTTATGATTTCACGGAGAGAACATATGAACGACAAGAACTTTGGTTCATGTCGCACCAAGGAGTGGAAAGAGATGGCATGTACATACCCAAGCTTGAGCCGGAAAGAATAGTATCCATTTTGGAATGGGATAGATGCGCTTCAATTGAGCATAGAATGGAAGCCATTTGTGCTGCAATGATAGAAGCATGGGGTTATGATGACCTGTTGCGGGCAATTCGCGAATTTTACCTGTGGATGCTTCAGCAAGAAGCCATGTATCAAATAGTGGCGGACGACAAGTACCCGTACATAACAGAAACAGCGCTCAAGAGATTGTATACCAACAAGGCAGCCAGTGATGTTGAGCTGGCTATGTATGAAGGGATATTTGATCTGTACGATTGCACAGATACCGTGGCATATCAAGCAAATGATGACATGGATGCTGGAGCTTCAAGCAGTAGTGTGAGTAAACCCAGGACGAACCAGCCTCAACCAAGCAAAAACGAACCGGAACGTGAGCAACCTTTGGTTGTAACGAGCAAGAAAGATTTGGATGTTGATGCAGGTAAGCGTGCATTTGCAATACCACGGTTGCAAAAACTGTCAAGCAGAATGAAACTACCGCTTGTGCTTGGGAAGCCTGTAATAAATATAGAACATCTGCTGGAGTATAAACCCGATCAGGTGGATCTATCAAACACTCGCGCAACTCATGTCCAGTTTCAAAACTGGTATGAGGCAGTGATGCGCGAGTATGAACTAGATGAGAAGAGCATGTCAACAGTGATGAACGGATTCATGGTTTGGAGCATTGAAAATGGAACTTCCCCAAATATAAATGGAGTGTGGGTGATGATGGACGGAGACACACAAGTTGAGTTCCCATTGAGACCAATTGTCGAGAATGCAAAACCAACTTTACGACAGATAATGCATCACTTCTCAGACGCAGCAGAGGCATATATAGAGATGCGCAACGCAGAGAAACCATACATGCCAAGGTATGGTTTACAAAGAAACTTACGCGACAAGAGCCTTGCACGATATGCATTTGATTTTTATGAGATTACAGCAAAAACTCCAGATCGTGCAAGGGAGGCGCACATGCAAATGAAAGCAGCAGCGCTAGGCAATGTAACAACCAAGATGTTTGGTTTGGATGGAAACATTGCAACGCAGCAAGAGGACACTGAGCGCCACACAGCCCATGATGTGAATGCAAACATGCATTCATTACTCGGCGTCAGAGGTCTGTGAACTTTCATACAAATATGCCAAGTAAACAGAATGAATTTATTTAAAATGTGTTTTAGATATCTATTTTCCGTTTACTAATTATGAAGAGATTGAGATGACAGACTATGAGTAGTGAGGTTCGGCCTCGTCATGCTTTGCAATCTCAATACATCTTT",
"target": null
}
6 changes: 6 additions & 0 deletions src/a/achyranthes_bidentata_mosaic_virus/ycd/isolate.json
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{
"id": "ycd",
"source_type": "isolate",
"source_name": "Zhejiang",
"default": true
}
9 changes: 9 additions & 0 deletions src/a/aconite_virus_a/290/715cms66.json
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{
"_id": "715cms66",
"accession": "NC_077052.1",
"definition": "Aconite virus A strain HB, complete genome",
"host": "Aconitum carmichaeli",
"segment": "Genome",
"sequence": "TACATGGGGGATAAACGAAACGAAAAGAACAGAGCTAAACATACACGACATATTCCGGAAAGAACATAGACTGTACGTATGGCTCTCACATATCGTAGCCCACTTGAGGAGGTACTTTCATCTTTTACCACAAGTGAGCAGAGTTTAATCTCTGCCACCGCAGTTGATAGGTACAAATACCTTGAGAAGGAAAATTTTGGTTTTTTCAACTATGCGTTAGAAGCTCATTCAAAAGAGCGTTTAATTCAAGCTGGAATTTACCTAAGCCCCTTTTCAGGTGTACCTCACTCGCACCCTGTGTGTAAAACATTGGAAAATTACATCCTGTATACGGTTCTGCCTAATTATGTAAATAGTGATTTTTACTTAGTAGGAATTAAACAAGGAAAGGTAAATTTCCTTAAACAGAGATGCCCAAGTCTGAACATGGTAAATGTTTTGAATCGGTACGTGACCTCACATGATAGGTTAAGGTATGGTGCTGATTTCGTGTGTGCAATCAGTGGAAATATGCCCGAAAACCTTAGCTCCAGGATCTGCTACAATAGCGACACATTGAGAGATTTGGTGCCGCATTGCATCCGTAGTAAGGCACGCTCCTTCTTCCTGCATGATGAATTACACTATTGGAGTAAGAGGGAATTAAAAGCATTTTTGTCTGCCTGTAAGCCTAGGGAATTAATCGGTACTTTAATCTACCCCCCGGAGTTGTTAATAGGCTGTCCTGAGAGTCTGAACCCATGGTGCTACAAATACACCATACACGGTAAGGATTTTGAATTTGCTCCTGACGGGGAATATACAGAGTCTTACATACAGCGCTTGGATTCCGGTTACCTGCTCCAGTGCAATAAAATAAAGCTTGAGGATGGGAGTATCTATTGTGTAGACGTGCTTGCCAGCAAGTTTGCGCATCATGTGATTGCTATTACGCGAGGTGATGCCGTGGTGCGCAGAAAGCGCAGTTTTTCTGGGTTCGAAGCCACAACTTGCACTGGGCTCGATAATTTGGCTGAGGGTACGAACAAGTTATGCATCCGGCTGCCATGCGATGTCACGATAGCGATTTACAAATATCTCAGGACCCTGCAGAAACCTGATGTCCAGTCAGCTGTTGCAAAGCTAGGTCAGTTGGTGAGGCACCCAACCGCTTACCAAATTAAATTCGTGCGCGAGTTCTCTGCAATGGTGATCAAGCATGGTGACTGTGATAAGTTATTTGGTGCTGAAAGTTTAATAGGGCTAAAGAAAATGCTTGCTGCCTCCTTACCGCGCTCCATGGTTTGTAGAGTGGCAGCGCTGCGCGACGTTTCGCTTGGCACTTTTGTTAACACGATGCAGCCTTTTGGATTTACTATTGCCTTGCATGAGTTAGGGAGTATATATGATGATTTGCTCTTGGGCAGTGATGATTGGGTGTCAGATGAGGCACCTGAAAAAATTTTAGCGAGCCTCGAAGGTCTCTATGATAAGGCTAGGGTTGGTGGGAATTTGCCCGTCTCTACGAGCTACGGGCCTTTTGGGTACTGTGACGTGGTTGAAGTAAATCCCAAAGTAGTGGTTGGGTGTCTGGTCTGGTTGCTTGTTAAGTCACACTGCTACTTTAGTCTCAGCCGCCTTGATAGCGCTGCTCTCGAAGCTTACATTACTGTAGTTTTTCGGCGATCATTTTTTGGGCCAGCTTGCTTGGAAGCCAAGGCACTCCGATGGTATGCAAGGAAATGTGAAGCCGCGTTGCTTGAACTTTGTGCTGCATACCGAGCGAGGGTGCGTCACCACGCGGGGTCAGTGTCATGGTTCATAGCCAAGCGAATGAGGCGATCTTTTTCCCGTTATCTCACCTATCCAGTCGCAGTTAGTGGCTTGGCTGTTGGAGAATTCAACATTGATGGTTCAACACATGCGGCAATTGATGCCTTGGTTCTTAGGCGGAAAGCTAATAAGCGGATAAGAGCTTATGCAAATCTGTGCCTAAGTTTATGTGCGCAAACTCGCAGCCCCTCTCCTTCCGATGGTCTGAATCCTTGGGGTATTGGGCCGACGGTAAGTTGTGTTGAAGAAATCCAGGGGGAGGTTACAAGCCGTGAGGGCGAGCCGCAAGTGCGACTTATTACGAGAGCTGACCTTGAAGTTGTAAAGCCGGCTGTAGCATCAAGTTCTAGTGAGAAGCAGCGCACTACCAAAATCTCTGCGAAATTGGTGGATTCTACTTCCAGCATGCCAGACTCGGCCTGGTTGGACCTAATGGGGCATTGCGCTGAGAGACGAGTCGATGGTGGTGGGGCTGTGACCTTGAGCATCAAAACTTTCTTCGGTGGGGATTTATTACCGCAGGGAACTCCTGATAAGCTGCGTATGAGGCATGCGGCTCGGTACACTCGTGATGGCTGTACTGAGTATAGCTACAACGGGGGCTCACATAAAAGTCGCGGCTGGGACATGACTTTTGACAAGTTGTTCATTATCAATGATATTGACGGTGACGCTTTTGATTGTTGCCTAGCGCAGAAGTATGAGGCTGGTGGAGCGATTGGGTTCCACTCAGATGATGAGCAAATATTTCAAGTTGGATGCCCGATCTTGACGATTAATGCCTTCGGTAGTGCCACATTTAGAGTTAAGTTTGGAGAGGAGGTTAAAGCTTTCCAAATTCAGGGTTCGGAGTATTTTATTATGCCTGAGCATTTCCAGGAGACGCATAAGCATTCTGTGACAAACTGCACTTCAGGGCGTATGAGCTTTACCTTCAGGAAGTTAGCTGCTGCCGGCGACAGATCTAAAAGCAAGTTTGATGAAGGAGCAATCCAGAGTTCCTCAAGTGAAGGGGGGAGGCCCGAGGGTGGTGATTTAGTCGCTGGCGATGGTGCACTGCAGGTTGTGAAGGCTGGAGCTTCGGGGCAAACTGCACCCGGCAATGTGAGTTATACAGAGGTTGCTATGCTTGGTTGCCTTGTGTGCTATAAGAGTGAGCCGAATCCAGAACAATTTGTCCGAATAGATGTACCTGGCGACGGGAATTGCTTTTATCATGCGGTTGGTTATTTTATAAAGTTGGGTGGGCTCGAGTTGAAGAAGGCTGCATTTCGAAATTGCTCAAGTGATGAATTGAATATGCCAGCTATCGTCGAGCAGATGCATGGGTCGAACTCAGCCGAGGGGGAGGCAGTCTGCCTGGTCGCACGCAAATTGAAAATGCGTATAAGGGTGCATGATCTGAACCAGAAGCTATGTGCAACTTTTTCTCCTGTAGCTGGGTTTGACTTGTCAATAGATTTGGTGCTAGAGAATGAGCATTATAATGTGGCTCTCCCTCGCAATGGATGTGTCTTGACCGCTATATGTGAGGCTCTCGGCCGCCCAAGGGCTGATATCCTCAAAGTCTTGAGCCGTGAAGAAAATAAGATGATCATGGGTAAGTTAGAGGAAGGGAATGGGCTCACTTTCCCTGTAGTTGAGAAGGCGATGGCAGCTTTCGGTATACGCTGTATTGTGGATAATGGTGAGGGGCTATTAACGCTGAATGAGCACGGGACTATTGAGCGCTGTTTCACATTCTTCGAAGATCATTTAGCTTTTGTAAAAAGGTTGGACGGCTTCTGCTTCTCGAGTAGGGATTCAACACAATCGCCTGGAGCCTTCGTGAGTCGCAGCGCACTAGCGTTGTTAGACTGTGCAGGGAGTAAAATTAATGCCGTCTTTGAGTTGGGTAGAGCTGAGAAGCTGATAGATAGTTTGCACAGTGGACTCACGGGCATTATGAGCTCAGAGTTGTTTAACTCAAGAAATCGGCTAGTACCCCTGACAAGTAGTGTGAGACTAGGCAGGTCTGTGACCACGATTTTGGGGACGTTTGGTAGCGGCAAGAGCACACTTTACCAGAATTTCTTCCAGCGTGCGCTTGGTAAGCATGTTCATTTTGTGTCGCCCAGGAAGGTGCTTGCTGGGGCTTTCAGGGATGAGTTGAATAACCTACGAGATAGTGGAGGTGCTGAGATTAGCAAGGAAGCGCGTAAGGGCTGGGTGGTCTGTACCTTTGAGACCTTCGTGCTTAATCATAAGAAGGTCAGCAGTTCGCATGTTGTGATCTTAGATGAAGTGCAGCTTTTCCCGCCGGGCTACCTTGACCTTATTGCTTATCTGCTGCCCCCACAAGTACTGATATATTTAGCTGGGGACCCTTGCCAGAGTGAATATGACAATGAGAGGGATCGTGCTTTCCTTGAACCGCTAGGGAACAACTTGGAGCATTTGTTGGGTGGTGAGAATTACCGCTATGCTACACTGAGCCACCGCTTCACGTATAATGGCTTCATCGGCCGGCTACCGTGCGAAATTAGAGAGGCAGAGACTGACAATGATGGCGCTATTGAGTTGTATAATGGTCTTGATGAGTTATCCTCTTGCGCTGCGGAGATCATCCTTGTGTCGAGCTTTACCGAGAAAAATGCCATAAAAGCGTATGCACCCCCGGGAGCGAAAATCATGACCTATGGTGAGAGTACTGGGTTGACAGTAAGCCATAGTGCTATAATTATATCACAGGCCTCTCGAGTGGCGAGCGAGGCACGCTGGCTAACCGCCCTTTCGAGGGCTAGAAAGCAGGTCTCACTATTCTCCACTTTGGAGGGCCATGAGTCTCGCGTGGTCGAATATTTTAGTAATAGGGTGCTTGGCAACTTCCTGGGGGTAACCGCAACCCTAGGGGATCTAACTGAGTTGATGCCGGGTAGGCCAAAATTTGTAGAGGATTTGATACCCTCTGCAGGGGCCGACTTCATGGTCGCCGAACTGAAATTGGCGGGCGACCCATGGCTCAAAAGTTCTATGTTTCTCGGTCAACGAAGCGATATACAGGAACCGGCTATTGAGGATGAGGATGACCCGACCGTGATTTTCCGTACCCACTTGCTTCGAAGTGAAATGGAGAACTCGCGAGTGGCCTTCATTGATAATATGCTTGCAAAAGAGAACAGGGAAAAACGGATGGGGCGCTTGGTCTCTGATCAATTCAGTGAGGATCATTCCAAGAACAATGGATACAGGTTAACTAATGCAGCTGAGCGTTTCGAAGCTATCTACCCTAGACATCGGGGAAGTGATACTGTAACATTCATAATGGCTGCCCGGAAAAGATTGCGCTTCTCCAAACCGTCAATCGAAATGGCTAAGCTAGCATCTGCAAAAGTATACGGCCCATTCATGCTAGAGGAATTCCTCAAACATGTGCCTCTCAAGCCTGGACTTGACAAGCAATTGATGGAAGAGTCTGTAGCTGAGTTTGAGAAGAAAAAGCTAAGTAAGAGTGCAGCAATCATAGAGAATCATGCTGGGCGATCTAATAGCGATTGGCCAGTGGACACCGGCTTGGTATTTATGAAATCACAGCATTGTACCAAGTTCGGGAACCGTTGCCAGATTGCTAAAGCAGCGCAATCGATTGTATGCTTTCAGCACTTCGTGCTCTGCCGTTTTGCTCCTTACATGCGATATATTGAGAAGAAGTTGCACCAAGTACTCCCACCGAATTTCTATATCCATAGTGGAAAAGGCCTAGATGAGCTCAATGCTTGGGTGAAGATTGGGAAATTTAGTGGGGTGTGCACCGAGTCAGACTACGAGGCTTTTGATGCAAGCCAGGACCACTTCATTATGGCTTTTGAGATTGAGGTGATGAGGTATCTCAGACTGCCAGTTGATCTTATTAATGATTACATCTTCATTAAAACACACTTAGGGTCCAAGCTGGGCAACTTTGCTATCATGAGATTTTCTGGCGAGGCAAGTACGTTTCTCTTTAATACTATGGCCAATATGTTGTTCACTTTCCTGCGTTATGACTTGAACGGTAAAGAATTCATATGTTTTGCAGGCGATGACATGTGCGCAGCCAAGCGCCTCAGGCACCGTTCCACTTATGAGGATTTCATGAGTAAGCTCAAGTTAAAAGCAAAGGTAGATTTCACGGCTAAGCCGACCTTCTGTGGTTGGAATTTATGCCCGGATGGCATTTACAAAAAACCTCAATTGCTATATGAGCGGATGTGTATTGCAATGGAGACGAATAACTTGGCAAGCTGTTTGGATAATTATGCGCTTGAAGCTTCTTATGCCTACAAGCTGGGGGAAAGGGCTATTGAGCGCATGGACGAATTGGAGCTCGCTAGCCACTATAACTGTGTGCGCCTCATAGTTAAAAAGAAATATCTACTCAAATCAGGGGTTGCAGATTTGTTCAAGGATACACTGGTTTAGCTTAAGTATTTGCTTAAAATTTGATAGTTTATGGATAGTGTGTATAAAGTACTTCTAGAGTGTGGCTTTGAGCGTATCAATAATTCACCAGGTATTGTGGTTGTTCATTGTGTACCTGGCGGTGGAAAAACTAGCGCTATTAGACGTATTTTAGAGATCTCGTCCAAATTCAGAGCTGTGACTTTTGGTGTTGCCGAAACTGAAAACCTGTCCTGTACCGCTATCCTTCCTGCTACAGCAGAAGCAAAAAGTAGACCTGGCGAGGTGTTGATCGTGGATGAGTATTGCATAGGTGATTGGAGAGCACTCAATCCCGCCGTGGTTTTTGGTGATCCTTGCCAAGGGGTCTTGACTGAAGTACTCCGGCCTGATTTCATCAAACGAAAGACTGAGCGTTTTGGAATTAACACTTGCAAGCTGTTAAGGACCCTAGGTTTCGAGGTTTATTCAGACAAGGAGGATCTGGTGGAATTCAACACGCCGTACGAGCAGGAGTTGGAGGGTCAGGTTATTGCCTTGGGTGTTGATGCTGAGCTTCTTTTAAAGAGACATAACGTTCCCTTCAAGTCTATCTGCTGCATCCGTGGGTTGACTTTTGACGTGGTAACTCTTGTGACCGGCGTGAGCTGCGCGACTGAGGCTGAACCAAAAGATCTTTACCAGTGCTTAACAAGGCACCGGAGAAAATTGCTGGTCCTAAACCCTGATGCCGCTCTCACCGCCAATTGATTACTCCAGAGTATTCATTGCAATTGTCATCGGCACGACCATAGGCTTGGCACTCTTTGCGCTCACCCGTAGTACTTTGCCGCACGTGGGCGATAATTTGCACAGTTTGCCGCACGGGGGGAGGTATCGTGACGGGACAAAATCGATAGATTATTGCGGCCCTAGGAAAACTTTCCCTTCAAGCTCACTTTTCGGATACAGTGGTAGCAACTTACCTGCTTTGGCCGTTTTCTTACTGGTGGCCGTAATTATTGCAATCTCGTCACGGCAGCAAACCACAACAAGGGCATGTAATTGCCAATGATCTTTAACCGTGTGGAAGTTGTCGCAGCCTTTTGCGCGATATTTCTCTGCTTCTGGTTGAGCACCCGACTGATCGGAAATAATCCGGGCTGCGTGGTCATTGTGAGCGGTGAGTCAATAACGATTAACGGTTGCGTTTGGGACGATAATTTCACGGAGTACGCAAAGAGTTTAAGAGTGGCTAAAGTTAATCTGCCTTAGGTTTTGGGCTTGAAATTGATTGAACAACATGGCAGACGAAACTCCCGCTGAGAGAGAGACTCGTGAAAGAGAACAAAAATCTGCTGAGGAGGCACGCAAGGCCCGTATGCAAGAGATGGCAAATAAACAGCGAGATGACAGGAAGGGCAAAGGCAAAGTTGGAGAAGGTTCCTCTCAAAACCCTGTGAATGAGATTGATCTCAACCAGCTGGAGAATGAAGTTGCTGAAGCTGGGAAATACCTGCAAAGATTCTCCAAGTTGAAGGATTTCAAGGCGCAAAATCTGACTGCTGGTACTGTGGTAAATGGGGGGTTCGAAACTGGTCGCCCGCCGCTGAGGGTGACAGACAATTTGCGTGGTGACACGACAAACGCCTTCACGAGGCCCAATCTTGATGCTTTGATGGGCTTGCGAATTAAGCCTGAATCTGGGCGCATCATGACTGCTGAGGAACTTGCTGCCATTTCTGCTAAGTTAGAAGGTTTGGGACTGCCCCCTGAAGAAACTGCGCCCCTCTTCTGGTCTATAGGGCGTTACTGCGCTGATGCTAGTTCTTCCCCTTATCTAGACCCGAAGGGCTCATACGAATTCAGTGGAGGTGCTATCACTCGTGATACTGTGATTGCTGTGATCAGGGATCATACGACCCTTCGCGCTTTCTGCAGGGCCTACGCACCGATAACATGGAACATGATGCTGATTACCAAAACGCCCCCTGCTAACTGGCAGTCAATGGGCTACCCGGCCGAGGCCAAATTCGCTGCTTTTGACGTGTTTGAATTTGTGATGAATCCAGCAGCCATACAGCCACTGGAAGGTTTGCTAAGGGTACCTACTAGTGATGAGCGGCTTGCCAGCGAGACGCATAAACGGCTAGCTATTGATGCCAATAGGCGCAACTCTCGGTTTTCGAGTTTGAATTCAAAGGTGACGGGAGGTTTGTACGGCCGTGAAGTTGAGACCGATTTCACTGGATCGAATAGCACGGCATGAATAAGATTAAAATCATCAAGCGGTTACTGGTGAGTGCTTTTAAGCAGAAAGTCACTAGGGTGGACTATGATGTAGTAAACTATATTAGTAGTTTGTGTGTATTGGGTAAGCCTGGAAGATCGAGCTATGCGAGAAAGCGTAGAGCCAAGCAATTGGCCCGATGCCCGCGTTGCTATCGGATGGACTTTCCACTTAGTCCTTTAAGTAGATGTGATGGAATCCATTGTGTGCCTGGTTTGAGTTACAACTCAAATATTGCCAGGAAGATAATGGGCTTAAAAAAAATGTAAGCTGTGTGTAAGACCTAAATAATTTAAACACACCGCTATAAGAAGAAGTGTGGTTTGAAATAATTTTCCGTACTTAAAAAAAAAAAAAAAAAAAAAA",
"target": null
}
6 changes: 6 additions & 0 deletions src/a/aconite_virus_a/290/isolate.json
Original file line number Diff line number Diff line change
@@ -0,0 +1,6 @@
{
"id": "290",
"source_type": "strain",
"source_name": "HB",
"default": true
}
13 changes: 13 additions & 0 deletions src/a/aconite_virus_a/otu.json
Original file line number Diff line number Diff line change
@@ -0,0 +1,13 @@
{
"_id": "3FbG083N",
"name": "Aconite virus A",
"abbreviation": "",
"schema": [
{
"molecule": "ssRNA+",
"name": "Genome",
"required": true
}
],
"taxid": 2764701
}
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