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Starred repositories

66 results for source starred repositories written in Shell
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Quickly create and run optimised Windows, macOS and Linux virtual machines

Shell 11,176 487 Updated Jan 5, 2025

WireGuard VPN installer for Linux servers

Shell 8,642 1,376 Updated Nov 7, 2024
Shell 7,992 1,101 Updated Jan 5, 2025

A conda-forge distribution.

Shell 6,845 344 Updated Jan 4, 2025

Manage your Java environment

Shell 5,945 384 Updated Jun 11, 2024

📖 Unofficial WireGuard Documentation: Setup, Usage, Configuration, and full example setups for VPNs supporting both servers & roaming clients.

Shell 4,675 321 Updated Dec 21, 2024

📥 Homebrew (un)installer

Shell 2,227 1,027 Updated Dec 30, 2024

A Microsoft Windows® USB installation media preparer for GNU+Linux

Shell 2,221 124 Updated Sep 28, 2023

Conda recipes for the bioconda channel.

Shell 1,659 3,312 Updated Jan 5, 2025

shUnit2 is a xUnit based unit test framework for Bourne based shell scripts.

Shell 1,620 212 Updated Oct 22, 2024

This Windows Batchscript helps setup a Mingw-w64 compiler environment for building ffmpeg and other media tools under Windows.

Shell 1,577 267 Updated Dec 5, 2024

R configurations for Docker

Shell 1,465 271 Updated Nov 1, 2024

text window manager, shell multiplexer, integrated DevOps environment

Shell 1,266 123 Updated May 2, 2024

GUI/CommandLine Tool Box for biologistists to utilize NGS data.

Shell 922 189 Updated Jan 1, 2025

An OSX print to pdf-file printer driver

Shell 857 80 Updated Sep 7, 2024

An X11 server and client libraries for macOS

Shell 851 55 Updated Jun 5, 2023

A "batteries-included" distribution of ImageJ 🔋

Shell 782 237 Updated Dec 12, 2024
Shell 754 535 Updated Jul 27, 2022

Cytoscape: an open source platform for network analysis and visualization

Shell 585 139 Updated Nov 18, 2024

Run current & prior versions of R using docker. rocker/r-ver, rocker/rstudio, rocker/shiny, rocker/tidyverse, and so on.

Shell 426 183 Updated Dec 19, 2024

A One-Click System for Analyzing Loop-Resolution Hi-C Experiments

Shell 421 183 Updated Nov 22, 2024

MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis

Shell 406 190 Updated Jul 28, 2023

the pangenome graph builder

Shell 405 44 Updated Jan 5, 2025

By study this, it won't be costly or time-consuming to customize a NGS data analysis pipeline

Shell 319 285 Updated Dec 21, 2018

[ICLR 2024] DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genome

Shell 302 69 Updated Dec 14, 2024

k-mer based assembly evaluation

Shell 296 21 Updated Jun 28, 2024

bioBakery tools for meta'omic profiling

Shell 265 75 Updated Oct 19, 2024

Run Rstudio Server in a conda environment

Shell 238 50 Updated Jun 12, 2024

🆔 Scan contig files against PubMLST typing schemes

Shell 205 48 Updated Oct 28, 2022

A user-friendly workflow for phylogenomics

Shell 204 26 Updated Oct 10, 2024
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