A collection of loss functions for medical image segmentation

Official PyTorch Code and Models of "RePaint: Inpainting using Denoising Diffusion Probabilistic Models", CVPR 2022

[ECCVW 2022] The codes for the work "Swin-Unet: Unet-like Pure Transformer for Medical Image Segmentation"

A pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation

Implementation of Super Resolution CNN in Keras.

LD Score Regression (LDSC)

Image Super-Resolution Using Deep Convolutional Networks in Tensorflow https://arxiv.org/abs/1501.00092v3

This Repository is implementation of majority of Semantic Segmentation Loss Functions

PyTorch implementation of Image Super-Resolution Using Deep Convolutional Networks (ECCV 2014)

Overview of the data QC, code, and GWAS summary output from the 2017 UK Biobank data release

normalize the intensities of various MR image modalities

Extracting meaningful health information from large accelerometer datasets

Code for NeurIPS 2020 article "Contrastive learning of global and local features for medical image segmentation with limited annotations"

Python command line tool for Multi-Trait Analysis of GWAS (MTAG)

A NIfTI (nii.gz) 3D Visualizer using VTK and Qt5

ABIDE Preprocessed Initiative

Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure

Harmonization of multi-site imaging data with ComBat (Python)

Toolbox for normative modelling and spatial inference of neuroimaging data. https://pcntoolkit.readthedocs.io/en/latest/

Multimodal deep learning for Alzheimer's disease dementia assessment

The open source toolbox for reproducible diffusion MRI-based microstructure estimation

Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variables with support for NIFTI images. Complements the work in Ne…

CELLECT (CELL-type Expression-specific integration for Complex Traits)

Toolbox for Differential Geometry on Triangle and Tetrahedra Meshes (FEM, Laplace, Poisson, Heat Flow ...)

AIDE: Annotation-efficient deep learning for automatic medical image segmentation

Python package for interacting with NDA web services. Used to validate, submit, and download data to and from NDA.

NumPy and Tensorflow implementation of the Multidimensional Contrast Limited Adaptive Histogram Equalization (MCLAHE) procedure