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Starred repositories

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MATLAB 2 1 Updated Oct 13, 2024

Composite vein imaging for susceptibility-based magnetic resonance imaging.

MATLAB 4 Updated Nov 14, 2017

Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space

C++ 49 7 Updated Jul 19, 2022
Roff 1 Updated Jul 1, 2024
6 Updated Oct 4, 2024

normalize the intensities of various MR image modalities

Python 312 59 Updated May 31, 2023

LST-AI - Deep Learning Ensemble for Accurate MS Lesion Segmentation

Python 23 4 Updated Dec 12, 2024

A utility R-package with consolidated tools and templates for staffs at Monash University

JavaScript 22 17 Updated Sep 17, 2024

[Brainlesion 2021] Official PyTorch Implementation for Reciprocal Adversarial Learning for Brain Tumor Segmentation: A Solution to BraTS Challenge 2021 Segmentation Task

Python 20 4 Updated Mar 12, 2024

GPU-accelerated bio-image analysis focusing on 3D+t microscopy image data

Jupyter Notebook 215 46 Updated Sep 29, 2024

A open toolbox of several machine learning approaches for sharp-wave ripple detection

PureBasic 26 4 Updated Jul 24, 2024

Your One-Stop Publication Workbench

TypeScript 10,440 643 Updated Dec 16, 2024

This repository contains the modified version of the rOMT algorithm part in rOMT repository.

MATLAB 2 1 Updated Jul 28, 2023

Python script for multivariate GWAS meta-analysis

Python 22 7 Updated Dec 6, 2024

Additional documentation for publicly available datasets on AWS

137 25 Updated Aug 29, 2024
MATLAB 2 1 Updated Jun 13, 2023

scripts that extract task timing and behavioral metrics

MATLAB 5 Updated Jun 27, 2024

Code for analyzing RNA-seq data, based off of data generated by Ashley Bolte in the Lukens lab at the University of Virginia

1 1 Updated Sep 27, 2020

Software to help identify overlap between association scan results and GWAS hit catalogs.

Python 14 5 Updated Aug 26, 2022
PostScript 2 Updated Apr 7, 2023

Scripts for processing RNA seq data

R 1 Updated Aug 7, 2020

A step by step guide on how to use eMAGMA, an approach to conducting eQTL informed gene-based tests.

63 33 Updated Feb 4, 2021

GCTA software

C++ 87 26 Updated Jul 19, 2024
Perl 25 6 Updated Sep 24, 2020

GWAS-TWAS (Transcriptome-wide association study)-Pharmacological library integration pipeline

R 17 6 Updated Mar 30, 2021
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