Fix pd.get_store() deprecation and add pytables dependency as a result

wsyxbcl · Apr 9, 2019 · dd87cd3 · dd87cd3
1 parent 90190f2
commit dd87cd3
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Showing 2 changed files with 3 additions and 2 deletions.
diff --git a/setup.py b/setup.py
@@ -33,7 +33,8 @@
     author_email = "[email protected]",
     url = "https://github.com/soft-matter/trackpy",
     install_requires = ['numpy>=1.8', 'scipy>=0.12', 'six>=1.8',
-	                'pandas>=0.13', 'pyyaml', 'matplotlib'],
+	                'pandas>=0.13', 'pyyaml', 'matplotlib',
+                        'tables'],
     packages = ['trackpy', 'trackpy.refine', 'trackpy.linking'],
     long_description = descr,
 )

diff --git a/trackpy/framewise_data.py b/trackpy/framewise_data.py
@@ -248,7 +248,7 @@ def __init__(self, filename, key='FrameData', mode='a', t_column='frame',
         self._t_column = t_column
         self.store = pd.HDFStore(self.filename, mode, **kwargs)
 
-        with pd.get_store(self.filename) as store:
+        with pd.HDFStore(self.filename) as store:
             try:
                 store[self.key]
             except KeyError: