Commits

Branch selector

 1471866

User selector

All users

Datepicker

All time

Commit History

Commits on Apr 17, 2018

• Improved SPAdes graph cleaning

  rrwick

  committed
  1471866

  Copy full SHA for 1471866

Commits on Apr 10, 2018

• Increase version number

  rrwick

  committed
  22cee71

  Copy full SHA for 22cee71

• Fix unittests for help text formatting

  rrwick

  committed
  3f8ade2

  Copy full SHA for 3f8ade2

Commits on Apr 9, 2018

• Use only 10 longest contigs when performing depth filter

  rrwick

  committed
  4123cd7

  Copy full SHA for 4123cd7

Commits on Apr 8, 2018

• Use only 10 longest contigs when normalising graph depth

  rrwick

  committed
  42b39fb

  Copy full SHA for 42b39fb

• Use only 10 longest contigs when estimating single-copy depth

  rrwick

  committed
  5ba9a5a

  Copy full SHA for 5ba9a5a

Commits on Jan 31, 2018

• Add ANSI formatting to help

  rrwick

  committed
  a5226b5

  Copy full SHA for a5226b5

• Add new option: --spades_tmp_dir

  rrwick

  committed
  0ea7b98

  Copy full SHA for 0ea7b98

Commits on Jan 24, 2018

• Stand-alone Pilon script

  rrwick

  committed
  3355405

  Copy full SHA for 3355405

Commits on Jan 23, 2018

• New option to specify exact k-mer sizes

  rrwick

  committed
  38a517f

  Copy full SHA for 38a517f

Commits on Jan 14, 2018

• Merge pull request rrwick#77 from kblin/setup-toolcheck

  Show description for 8a605ee
  rrwick

  authored
  8a605ee

  Copy full SHA for 8a605ee

Commits on Jan 12, 2018

• New --min_anchor_seg_len option

  rrwick

  committed
  a3824ba

  Copy full SHA for a3824ba

• New --min_anchor_seg_len option

  rrwick

  committed
  ee4bfeb

  Copy full SHA for ee4bfeb

• New --min_anchor_seg_len option

  rrwick

  committed
  f5b97fb

  Copy full SHA for f5b97fb

Commits on Jan 10, 2018

• setup: More explicitly tell user if all tools were found

  Show description for e4f352f
  kblin

  committed
  e4f352f

  Copy full SHA for e4f352f

• setup: Add a new command to check for missing tools standalone

  Show description for 9ddbe54
  kblin

  committed
  9ddbe54

  Copy full SHA for 9ddbe54

• setup: Factor out the missing tool check

  Show description for 4045ea6
  kblin

  committed
  4045ea6

  Copy full SHA for 4045ea6

Commits on Jan 9, 2018

• New version number

  rrwick

  committed
  229aaf5

  Copy full SHA for 229aaf5

• Fix off-by-one error with contig placement

  rrwick

  committed
  9aceb23

  Copy full SHA for 9aceb23

Commits on Jan 5, 2018

• Hide errors in make

  rrwick

  committed
  1f6c2a7

  Copy full SHA for 1f6c2a7

• Fix fraction vs percentage bug - caused slow path finding

  rrwick

  committed
  5a45aeb

  Copy full SHA for 5a45aeb

• Code formatting

  rrwick

  committed
  8668223

  Copy full SHA for 8668223

Commits on Jan 4, 2018

• Merge branch 'development' of https://github.com/rrwick/Unicycler into development

  rrwick

  committed
  aca61b7

  Copy full SHA for aca61b7

• Fix logging crash when using contamination filter

  rrwick

  committed
  7e6756a

  Copy full SHA for 7e6756a

• Merge pull request rrwick#74 from cerebis/master

  Show description for 4149580
  rrwick

  authored
  4149580

  Copy full SHA for 4149580

Commits on Dec 19, 2017

• Support for GCC7 under Fedora

  cerebis

  committed
  dfaca5e

  Copy full SHA for dfaca5e

• merge conflicts

  cerebis

  committed
  4ec7b6c

  Copy full SHA for 4ec7b6c

Commits on Dec 5, 2017

• Merge branch 'development' of https://github.com/rrwick/Unicycler into development

  rrwick

  committed
  4aa9447

  Copy full SHA for 4aa9447

• Limit Pilon polishes to prevent infinite loop

  rrwick

  committed
  1022016

  Copy full SHA for 1022016

Commits on Nov 17, 2017

• Fix issues with miniasm-based dead end trimming

  rrwick

  committed
  d965614

  Copy full SHA for d965614

• Fix issues with miniasm-based dead end trimming

  rrwick

  committed
  d3befe6

  Copy full SHA for d3befe6

• Fix issues with miniasm-based dead end trimming

  rrwick

  committed
  e052763

  Copy full SHA for e052763

Commits on Nov 14, 2017

• Use wider insert size range

  rrwick

  committed
  a47b3ac

  Copy full SHA for a47b3ac

• Use minimap2 instead of unicycler_align

  rrwick

  committed
  50ee198

  Copy full SHA for 50ee198

Commits on Nov 12, 2017

• Beta version number

  rrwick

  committed
  77c9763

  Copy full SHA for 77c9763

Pagination

Previous

Next