Commits

Branch selector

 master

User selector

fidelram

Datepicker

All time

Commit History

Commits on Jun 22, 2021

• new options to rank_genes_groups plots (scverse#1529)

  Show description for 9e1a27b
  

  fidelram

  and

  ivirshup

  authored
  9e1a27b

Commits on Feb 10, 2021

• fixes dendrogram issue scverse#1228 (scverse#1614)

  Show description for abfaef4
  

  fidelram

  and

  ivirshup

  authored
  abfaef4

Commits on Feb 2, 2021

• Allow plots to use adata.obs index as groupby (scverse#1583)

  Show description for 81dbae9
  

  fidelram

  and

  ivirshup

  authored
  81dbae9

Commits on Jan 27, 2021

• Address issues with heatmaps reported in scverse#1591 (scverse#1603)

  fidelram

  authored
  9e13ca9

Commits on Jan 14, 2021

• updated test that works with pandas 1.2 (scverse#1584)

  fidelram

  authored
  2a12306

Commits on Dec 4, 2020

• small test change.

  

  fidelram

  authored and

  ivirshup

  committed
  f89d400

• instead of a boolean for slicing use indices

  

  fidelram

  authored and

  ivirshup

  committed
  cc27d11

• fix col names. Add test to check col names order and content

  

  fidelram

  authored and

  ivirshup

  committed
  5a4260b

• use ordered indices to allow slicing in backed mode. Update backed tests.

  

  fidelram

  authored and

  ivirshup

  committed
  93ce4ae

• remove parameter use_raw from sc.get.var_df

  

  fidelram

  authored and

  ivirshup

  committed
  27bab5f

• fix indices for raw data. Update tests

  

  fidelram

  authored and

  ivirshup

  committed
  2bbca4b

• fix issue with sparse matrices. Add sparse matrix to tests

  

  fidelram

  authored and

  ivirshup

  committed
  83424d8

• add test for backed mode vs memory.

  

  fidelram

  authored and

  ivirshup

  committed
  8bf5eb6

• add optimization to sc.get.var_df and add 'use_raw' to parameters.

  

  fidelram

  authored and

  ivirshup

  committed
  b50f698

• use df.join instead of pd.concat

  

  fidelram

  authored and

  ivirshup

  committed
  fe2638b

• use pandas assert to compare data frames for var_df tests and add a couple of new tests.

  

  fidelram

  authored and

  ivirshup

  committed
  2bb76b8

• use pandas assert to compare data frames. Fix issue with dtypes.

  

  fidelram

  authored and

  ivirshup

  committed
  081065b

• use _get_obs_rep method.

  

  fidelram

  authored and

  ivirshup

  committed
  c5c2d65

• add new cases to test and 'black' test_get.py

  

  fidelram

  authored and

  ivirshup

  committed
  8013985

• fix case when no var_names or no obs_names are given.

  

  fidelram

  authored and

  ivirshup

  committed
  e58fdbe

• Speed up 10 fold sc.get.obs_df when querying var names.

  

  fidelram

  authored and

  ivirshup

  committed
  b86af2f

Commits on Sep 24, 2020

• Added missing documentation. Fixed option to set colorbar title. (scverse#1425)

  fidelram

  authored
  62bb643

Commits on Aug 1, 2020

• fix missing yticklabels (scverse#1342)

  Show description for 2ea9f83
  fidelram

  authored
  2ea9f83

Commits on Jul 29, 2020

• split BasePlot.show() into show and savefig to match matplotlib style (scverse#1329)

  Show description for d4d373e
  fidelram

  authored
  d4d373e

Commits on Jul 21, 2020

• updated documentation to point to latest plotting tutorial (scverse#1319)

  Show description for f59ebb8
  

  fidelram

  and

  falexwolf

  authored
  f59ebb8

Commits on Jul 13, 2020

• updated documentation images; fix style overwrite after multiple calls to style(); added padding parameter to style to address scverse#1270; add legend width units to documentation. (scverse#1316)

  fidelram

  authored
  1a45e1c

Commits on Jul 10, 2020

• Fix docs for new plotting classes (scverse#1309)

  Show description for 529336d
  

  fidelram

  and

  flying-sheep

  authored
  529336d

Commits on Jun 29, 2020

• improvements on plotting functions that use 'groupby' (scverse#1210)

  Show description for b910afc
  fidelram

  authored
  b910afc

Commits on Oct 30, 2019

• Merge pull request scverse#899 from theislab/layer_to_violin

  Show description for c02d285
  fidelram

  authored
  c02d285

• updated test image; fixed black

  fidelram

  committed
  fdbff3f

• updated violin test image for notebook related to the new default cut=0

  fidelram

  committed
  723766b

• added violin test image with layer

  fidelram

  committed
  948895f

• added violin test with layer

  fidelram

  committed
  fabe118

• added support for layers to sc.pl.violin. Added cut=0 as default, similar to stacked_violin

  fidelram

  committed
  770de20

Commits on Oct 29, 2019

• Fix plot issues (scverse#893)

  Show description for 27115e3
  

  fidelram

  authored and

  flying-sheep

  committed
  27115e3

Pagination

PreviousNext