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  1. gatk gatk Public

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  2. gatk-1 gatk-1 Public

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    GATK Official Release Repository: contains the core MIT-licensed GATK framework, free for all uses

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  3. gatk-protected gatk-protected Public

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    GATK Official Release Repository: contains the core MIT-licensed GATK framework, plus "protected" tools restricted to non-commercial use only

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    Java Bindings (JNI) for bwa

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