use url instead of PMID

yuxiaohui78 · Jun 9, 2015 · d012b7f · d012b7f
1 parent 0f0539f
commit d012b7f
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Showing 5 changed files with 9 additions and 12 deletions.
diff --git a/htmlGenerator.py b/htmlGenerator.py
@@ -8,15 +8,12 @@
 </head>
 <body>"""
 print head
-urlHead = '<a href="http://www.ncbi.nlm.nih.gov/pubmed/?term='
+urlHead = '<a href="'
 urlTail = "</h3></a>"
 for pmid in pmidList:
-    _pmid, title = pmid.split('#')
-    entry = urlHead + _pmid[6:-1] + '" target="_blank"><h3>' + _pmid[:-1] + urlTail
-    description = "<p>" + title[7:] + "</p>"
-
+    _pmid, title = pmid.split('!!')
+    entry = urlHead + _pmid[5:-1] + '" target="_blank"><h3>' + _pmid[5:-1] + urlTail
     print entry
-    print description
 
 tail = """
 </body>

diff --git a/jsonParser.pl b/jsonParser.pl
@@ -14,7 +14,7 @@
         next;
     }
     $result = decode_json($readinline);
-    $pmid = "PMID- 88888888\n";
+    $pmid = "URL- " . $result->{'url'} . "\n";
     $title = "Title- " . $result->{'title'};
     $abstract = "Abstract- " . $result->{'abstract'};
 

diff --git a/keywords.txt b/keywords.txt
@@ -1,5 +1,4 @@
-Text
-Mining
+use
 #this key word will be ignore
 #instead of write
 #Text Mining

diff --git a/preProcess.pl b/preProcess.pl
@@ -12,12 +12,13 @@
     if ($readinline =~ /^\n/) {
         next;
     }
-    $pmid = "";
+    $pmid = "URL- http://www.ncbi.nlm.nih.gov/pubmed/";
     $title = "Title- ";
     $abstract = "Abstract- ";
 
     #PMID
-    $pmid .= $readinline;
+    $readinline =~ /(\d+)\n/;
+    $pmid .= $1 . "\n";
 
 
     while ($readinline = <FILE>) {

diff --git a/stem.pl b/stem.pl
@@ -9,7 +9,7 @@
     if (/^\n/) {
         print $output "\n";
     }
-    if (/^PMID/) {
+    if (/^URL/) {
         print $output $_;
         $_ = <>;
     }