zengxiaofei
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HapHiC Public
HapHiC: a fast, reference-independent, allele-aware scaffolding tool based on Hi-C data
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yahs Public
Forked from c-zhou/yahsYet another Hi-C scaffolding tool
C MIT License UpdatedAug 26, 2024 -
HiC_tools Public
Forked from mdozmorov/HiC_toolsA collection of tools for Hi-C data analysis
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small-contig-reassignment Public
To reassign small contigs after manual grouping by small contig removal, rescue & optimization
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mike Public
Forked from Argonum-Clever2/mikeC++ GNU General Public License v3.0 UpdatedFeb 4, 2024 -
rust_code Public
Rust coding practice
Rust BSD 3-Clause "New" or "Revised" License UpdatedJan 20, 2024 -
paf2dotplot Public
Forked from moold/paf2dotplotDraw a dot plot from a paf alignment
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ALLHiC-1 Public
Forked from tangerzhang/ALLHiCALLHiC: phasing and scaffolding polyploid genomes based on Hi-C data
Perl UpdatedApr 18, 2023 -
allhic Public
Forked from tanghaibao/allhicGenome scaffolding based on HiC data in heterozygous and high ploidy genomes
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DeepConsensus-utils Public
Some scripts for accelerating subreads-to-CCS alignment
Python BSD 3-Clause "New" or "Revised" License UpdatedSep 13, 2021 -
ssub Public
A simple script for submitting jobs on LSF or PBS
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monolignol-biosynthesis Public
Custom scripts and data in the study of monolignol biosynthesis pathway in Miscanthus × giganteus
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CESA Public
A collection of custom scripts used in the research of MgCesA genes
R UpdatedJan 17, 2020 -
PCR-duplication Public
How to remove PCR duplication in NGS data correctly
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snodes Public
Forked from FrasergenBioinformatics/SGE-scriptsSome scripts for managing nodes and jobs on SGE
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PBS-scripts Public
Some scripts for managing nodes and jobs on PBS
Python GNU General Public License v3.0 UpdatedApr 14, 2019 -
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typecho Public
Forked from typecho/typechoA PHP Blogging Platform. Simple and Powerful.
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busco-tree Public
A pipeline to construct phylogenetic tree using BUSCOs
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MenuTree Public
Forked from wuruowuxin74/MenuTreeTypecho 插件 自动生成文章目录树 原作者:Melon 原版本:0.1.0
PHP UpdatedMay 24, 2018 -
Typecho-ViewsCounter Public
Forked from Quarkay/Typecho-ViewsCounterA plugin of typecho for statisticing the visit counts of the posts.
PHP GNU General Public License v2.0 UpdatedMay 12, 2018 -
jcvi Public
Forked from tanghaibao/jcviPython utility libraries on genome assembly, annotation and comparative genomics
Python BSD 2-Clause "Simplified" License UpdatedJan 17, 2018 -
PJM Public
A simple job manager for PBS (Portable Batch System)
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quota-alignment Public
Forked from tanghaibao/quota-alignmentGuided synteny alignment between duplicated genomes (within specified quota constraint)
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