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Commits on Mar 8, 2023

• Update CITATION

  zhengxwen

  committed
  9565ed6

Commits on Feb 8, 2022

• need&use GDS_New_SpCMatrix2

  zhengxwen

  committed
  a5d07e2

Commits on Sep 14, 2021

• update test_func.R

  zhengxwen

  committed
  7c877ec

Commits on Mar 31, 2020

• update .tolist on annotation/format/*

  zhengxwen

  committed
  94f2f74

Commits on Mar 22, 2020

• fix checkequal

  zhengxwen

  committed
  489c0f5

Commits on Dec 25, 2019

• update seqAlleleFreq() if ref.allele has NA

  zhengxwen

  committed
  77cad49

Commits on Dec 24, 2019

• add .padNA=TRUE to seqGetData()

  zhengxwen

  committed
  b1500c4

Commits on Nov 5, 2019

• Update CITATION

  zhengxwen

  committed
  b550b0b

Commits on Sep 4, 2019

• fix test_info_geno according to VariantAnnotation

  zhengxwen

  committed
  43d6387

Commits on Aug 21, 2019

• RNGkind for R < 3.6

  zhengxwen

  committed
  2474e54

Commits on Aug 5, 2019

• RNGkind("Mersenne-Twister", "Inversion", "Rounding")

  Show description for e70a2f9
  zhengxwen

  committed
  e70a2f9

Commits on Jul 6, 2019

• improve unix forking processes for load balancing in seqParallel()

  zhengxwen

  committed
  aacce4f

Commits on Jun 8, 2019

• more unit tests for seqParallel()

  zhengxwen

  committed
  e356ce9

Commits on Mar 22, 2019

• update

  zhengxwen

  committed
  2b7450d

Commits on Feb 26, 2019

• bgzip CEU_Exon.vcf.gz

  zhengxwen

  committed
  bd49ebf

Commits on Feb 23, 2019

• fixed asVCF unit test

  

  smgogarten

  committed
  5769385

Commits on Nov 3, 2018

• try appveyor.yml

  zhengxwen

  committed
  5a8ce7f

• temporary setting for travis.yml

  zhengxwen

  committed
  51ee481

Commits on Oct 9, 2018

• update header method for changes in VariantAnnotation 1.27.6

  smgogarten

  committed
  3fed63f

Commits on Apr 28, 2018

• new variable "$dosage_alt" in seqGetData() and seqApply()

  zhengxwen

  committed
  9df3994

Commits on Apr 14, 2018

• RLE of chromosome for faster indexing

  zhengxwen

  committed
  27a3abc

Commits on May 18, 2017

• Methods rely only on imported packages

  Show description for 47a4735
  smgogarten

  committed
  47a4735

Commits on May 17, 2017

• Redefine generics from VariantAnnotation and SummarizedExperiment

  Show description for 7d9c700
  smgogarten

  committed
  7d9c700

• define methods within seqAsVCFInit (not separate script)

  Show description for 1e197e3
  smgogarten

  committed
  1e197e3

Commits on May 7, 2017

• use zlib in seqVCF2GDS according to the limit of 32-bit Win system

  zhengxwen

  committed
  841d9ea

• using zlib instead of lzma in the examples for the limit of 32-bit Win system

  zhengxwen

  committed
  b9b43a3

Commits on May 6, 2017

• fix warnings in UnitTest

  zhengxwen

  committed
  78553eb

Commits on May 5, 2017

• seqAsVCFInit() and seqAsVCF()

  zhengxwen

  committed
  45c3430

Commits on May 3, 2017

• not import VariantAnnotation methods until seqAsVCF() is called

  zhengxwen

  committed
  bc129c5

Commits on Apr 11, 2017

• typo

  zhengxwen

  committed
  7f29ca6

Commits on Mar 21, 2017

• inst/CITATION

  zhengxwen

  committed
  31d85e5

Commits on Mar 3, 2017

• Copyright year ==> 2017

  zhengxwen

  committed
  5d3c1a5

Commits on Mar 2, 2017

• more unit tests with seqBlockApply()

  zhengxwen

  committed
  07c66ac

Commits on Jan 6, 2017

• try to fix appveyor

  zhengxwen

  committed
  395395a

• try to fix appveyor

  zhengxwen

  committed
  f4acc2d

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