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AD Toolbox: A python package for modeling and optimization on anaerobic digestion process

HTML 2 2 Updated Dec 10, 2024

REference Sequence annotation and CuRatIon Pipeline

Python 96 26 Updated Feb 10, 2025

PoloDB is an embedded document database.

Rust 1,005 51 Updated Nov 22, 2024

Native Dask collection for awkward arrays, and the library to use it.

Python 62 19 Updated Mar 3, 2025

Machine learning glossary

Python 3,052 732 Updated Aug 8, 2024

ML Learning Sabbatical Study Materials

Jupyter Notebook 133 54 Updated Apr 17, 2017

HMMER: biological sequence analysis using profile HMMs

C 336 73 Updated Jan 30, 2025

Python bindings for the TaxonKit library

Python 33 3 Updated Jan 2, 2025

PaperBLAST: find papers about a protein or its homologs

Perl 39 6 Updated Jan 21, 2025

A modular graph-based Retrieval-Augmented Generation (RAG) system

Python 23,211 2,316 Updated Mar 7, 2025

Legend made easy for matplotlib

Python 23 Updated Feb 4, 2025

☁️ Build multimodal AI applications with cloud-native stack

Python 21,390 2,218 Updated Feb 27, 2025

A curated list of awesome things related to Pydantic! 🌪️

579 42 Updated Mar 7, 2025

PyRanges as a DataFrame subclass.

Python 14 2 Updated Dec 25, 2024

Design of experiments for Python

Python 36 3 Updated Aug 19, 2024
Python 8 2 Updated Dec 11, 2024

Performant Pythonic GenomicRanges

Python 453 47 Updated Mar 7, 2025

Single-cell analysis in Python. Scales to >100M cells.

Python 2,033 610 Updated Mar 4, 2025

Declarative creation of composable visualization for Python (Complex heatmap, Upset plot, Oncoprint and more~)

Python 248 9 Updated Feb 13, 2025
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