Skip to content

Commit

Permalink
Linking Kraken programs to README
Browse files Browse the repository at this point in the history
  • Loading branch information
Jennifer Lu committed Apr 19, 2020
1 parent 74d6ea8 commit 57322a2
Showing 1 changed file with 10 additions and 0 deletions.
10 changes: 10 additions & 0 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -5,6 +5,16 @@ KrakenTools is a suite of scripts to be used for post-analysis of
Kraken/KrakenUniq/Kraken2/Bracken results. Please cite the relevant paper
if using KrakenTools with any of the listed programs.

## Links to Kraken github pages
1. [Kraken 1](https://github.com/DerrickWood/kraken)
2. [Kraken 2](https://github.com/DerrickWood/kraken2)
3. [KrakenUniq](https://github.com/fbreitwieser/krakenuniq)
4. [Bracken](https://github.com/jenniferlu717/Bracken)

For issues with any of the above programs,
please open a github issue on their respective github pages.
This github repository is dedicated to only the scripts provided here.

## Scripts included in KrakenTools
1. [extract\_kraken\_reads.py](#extract\_kraken\_readspy)
2. [combine\_kreports.py](#combine\_kreportspy)
Expand Down

0 comments on commit 57322a2

Please sign in to comment.