Global-landscape-of-SARS-CoV-2-variants

We deposited the data and codes for articles entitled "Global landscape of SARS-CoV-2 genomic surveillance and data sharing".

Name		Name	Last commit message	Last commit date
Latest commit History 9 Commits
1.1_All_sequence_clean.R		1.1_All_sequence_clean.R
1.2_All_sequence_deduplicate.R		1.2_All_sequence_deduplicate.R
2.1_GISAID_sequence_clean.R		2.1_GISAID_sequence_clean.R
3_Variant_check.R		3_Variant_check.R
4.1_Fig1_genome_str_map.R		4.1_Fig1_genome_str_map.R
4.2.1_Fig2_seq_tech_plat.R		4.2.1_Fig2_seq_tech_plat.R
4.2.2_Fig2_seq_distribution.R		4.2.2_Fig2_seq_distribution.R
4.3_Fig3_public_availability.R		4.3_Fig3_public_availability.R
4.4_Fig4_variant_identification.R		4.4_Fig4_variant_identification.R
4.5_Fig5_Global_spread.R		4.5_Fig5_Global_spread.R
4.6_Fig6_variant_num_proportion.R		4.6_Fig6_variant_num_proportion.R
5.1_Extend_fig_turnaround_time.R		5.1_Extend_fig_turnaround_time.R
5.2_Extend_fig_coverage_corr.R		5.2_Extend_fig_coverage_corr.R
Acknowledgement_table.zip		Acknowledgement_table.zip
Aggregated_dataset.csv		Aggregated_dataset.csv
README.md		README.md
WHO_country.xlsx		WHO_country.xlsx

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