A prediction-based extension of network-based statistics.

Visualizing with Freesurfer using Python

A Python package to facilitate the development, parallel simulation, optimization and analysis of multiscale biological neuronal networks in NEURON.

Main TVB codebase

A cross-platform descriptive command-line framework for applications

hub.neurohackademy.org: Deployment config, docker image, documentation.

Summer course content for Neuromatch Academy

3D force-directed graph component using ThreeJS/WebGL

A collaborative list of resources for Computational Neuroscience

Centralized registry of Jitsi rooms and pdfs for OHBM 2020 posters.

Cortical neuroimaging visualization in Python

Stream your reMarkable screen over SSH.

Software platform for clinical neuroimaging studies

BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics datasets | available in both Python and Matlab |

A Deep Learning based project for colorizing and restoring old images (and video!)

Image restoration with neural networks but without learning.

Automated anatomical brain label/shape analysis software (+ website)

GLSL volume ray casting rendering: compiled versions available from NITRC. Able to view NIfTI, DICOM, MGH, MHD, NRRD, AFNI format images.

fMRIprep is a functional magnetic resonance image pre-processing pipeline that is designed to provide an easily accessible, state-of-the-art interface that is robust to differences in scan acquisit…

The NEST simulator

Open schemas for F.A.I.R. neuroscience data

The science behind The Virtual Brain

Useful super pack for working with TVB

Landmark based registration of brain imaging volumes

Automatic analysis

The Virtual Brain framework. Requires tvb-library