Commits

Branch selector

 master

User selector

aaronmussig

Datepicker

All time

Commit History

Commits on Oct 15, 2021

• Add timeout to release workflow to allow for PyPI to publish for Docker build.

  aaronmussig

  committed
  c1de6f5

• Merge pull request #346 from Ecogenomics/staging

  Show description for eaccdd6
  aaronmussig

  authored
  eaccdd6

Commits on Oct 11, 2021

• docs(#354): Incremented minor version and removed tmpdir from unused pipelines.

  aaronmussig

  committed
  3734926

• Merge pull request #354 from tr11-sanger/master

  Show description for 8198a07
  aaronmussig

  authored
  8198a07

• Documentation and unit test updates.

  aaronmussig

  committed
  66bd8e5

• fix(#351): Ensure CPUs is an integer value.

  aaronmussig

  committed
  d21b36a

Commits on Oct 10, 2021

• docs(#349): Update documentation to clarify custom_taxonomy_file.

  aaronmussig

  committed
  38683e5

• Set correct extract command for GTDB-Tk install documentation.

  aaronmussig

  committed
  40a25dd

• fix(#351): Fixed an issue where GTDB-Tk would crash if spaces were present in the reference data path.

  aaronmussig

  committed
  6d2d487

Commits on Sep 16, 2021

• docs(#348): Update changelog.

  aaronmussig

  committed
  ec99a20

• fix(#348): Gracefully exit / add additional warnings for failure to identify single copy hits.

  aaronmussig

  committed
  c51b544

• Type hinting and minor refactor of export_msa workflow

  aaronmussig

  committed
  6a17416

• Update documentation.

  aaronmussig

  committed
  640650a

Commits on Sep 13, 2021

• chore(Docker): Update Docker image to use python base, and minor version updates.

  aaronmussig

  committed
  4f93d1f

Commits on Sep 12, 2021

• chore(Docker): Use GitHub Actions for publishing Docker images.

  aaronmussig

  committed
  6dbc45d

• fix(#336): Warn the user if they have provided an incorrectly formatted taxonomy file.

  aaronmussig

  committed
  78a7b5f

Commits on Aug 20, 2021

• Merge pull request #340 from Ecogenomics/staging

  Show description for 80a4801
  aaronmussig

  authored
  80a4801

Commits on Aug 17, 2021

• Merge pull request #341 from Ecogenomics/feat/remove-recalculate-red

  Show description for 0358330
  aaronmussig

  authored
  0358330

• Remove the option to re-calculate RED.

  aaronmussig

  committed
  8d650b5

Commits on Aug 15, 2021

• Update changelog with #335.

  aaronmussig

  committed
  c62e0f7

• Merge pull request #335 from fplaza/master

  Show description for a681475
  aaronmussig

  authored
  a681475

• fix(#337): Set minimum tqdm version to 4.35.0

  aaronmussig

  committed
  bad8c74

Commits on Jun 24, 2021

• Merge pull request #328 from Ecogenomics/staging

  Show description for d18e4c2
  aaronmussig

  authored
  d18e4c2

• fix(#326): Disallow blank/zero length genome names.

  aaronmussig

  committed
  5d9ef03

Commits on Jun 22, 2021

• Prepare for 1.5.1

  aaronmussig

  committed
  c7ffe3c

• Disallow spaces in genome names/file paths due to downstream application issues (#327)

  aaronmussig

  committed
  bb3637c

Commits on Apr 26, 2021

• Merge pull request #318 from Ecogenomics/staging

  Show description for f678ca6
  aaronmussig

  authored
  f678ca6

Commits on Apr 22, 2021

• update ref hashes

  aaronmussig

  committed
  5503e2c

• safety when checking for failed genomes

  aaronmussig

  committed
  e62c5fa

• update memory requirements

  aaronmussig

  committed
  61e1e88

• Merge remote-tracking branch 'origin/change_path_genomes' into staging

  aaronmussig

  committed
  34d9474

• update documentation for r202

  aaronmussig

  committed
  3932397

• update documentation for r202

  aaronmussig

  committed
  8f684c2

• update exception error message

  aaronmussig

  committed
  bc89029

• terminate writer proc if initialised (#313)

  aaronmussig

  committed
  b0ed0c1

Pagination

PreviousNext