RomarioSales
Follow
-
generative-ai-for-beginners Public
Forked from microsoft/generative-ai-for-beginners12 Lessons, Get Started Building with Generative AI 🔗 https://microsoft.github.io/generative-ai-for-beginners/
Jupyter Notebook MIT License UpdatedJan 17, 2024 -
phoenix Public
Forked from CDCgov/phoenix🔥🐦🔥PHoeNIx: A short-read pipeline for healthcare-associated and antimicrobial resistant pathogens
Python Apache License 2.0 UpdatedDec 5, 2023 -
BI-BE-CS-183-2023 Public
Forked from pachterlab/BI-BE-CS-183-2023Introduction to Computational Biology and Bioinformatics Course at Caltech, 2023
Jupyter Notebook UpdatedSep 21, 2023 -
star_protocols_wes3x Public
Forked from moulos-lab/star_protocols_wes3xFunctional code templates for the Star Protocols paper describing consolidated WES variant calling with 3 callers
Shell GNU General Public License v3.0 UpdatedAug 30, 2023 -
PanExplorer Public
Forked from SouthGreenPlatform/PanExplorerWeb application to explore bacterial pangenomes
HTML GNU General Public License v3.0 UpdatedAug 18, 2023 -
-
Single-cell-RNA-sequencing-analysis Public
Forked from Yatir-Solan/Single-cell-RNA-sequencing-analysisIn order to learn scRNAseq analysis, I decided to reconstruct a Nature paper using Python's Scanpy package. The paper examined lung cells from multiple COVID-19 patients to construct a comprehensiv…
Jupyter Notebook UpdatedJun 9, 2023 -
Assembly-Dereplicator Public
Forked from rrwick/Assembly-DereplicatorA tool for removing redundant genomes from a set of assemblies
Python GNU General Public License v3.0 UpdatedFeb 20, 2023 -
FriPan Public
Forked from drpowell/FriPanInteractive, web tool for exploring pan-genome of bacterial strains
JavaScript MIT License UpdatedDec 2, 2022 -
-
snippy Public
Forked from tseemann/snippy✂️ ⚡ Rapid haploid variant calling and core genome alignment
Perl GNU General Public License v2.0 UpdatedOct 17, 2022 -
intro_python_ismb2022 Public
Forked from SantosRAC/intro_python_ismb2022Jupyter Notebook MIT License UpdatedJul 7, 2022 -
Python-Studies Public
Forked from kilerhg/Python-StudiesAll studies about python
Python UpdatedFeb 1, 2022 -
complex-upset Public
Forked from krassowski/complex-upsetA library for creating complex UpSet plots with ggplot2 geoms
R MIT License UpdatedDec 10, 2021 -
Bioinformatica Public
Forked from lmigueel/BioinformaticaPipelines e scripts para análises em Bioinformática
GNU General Public License v3.0 UpdatedSep 21, 2021 -
somatico Public
Forked from renatopuga/somaticoGATK 4 Mutect2 Somático
MIT License UpdatedAug 20, 2021 -
An-Introduction-To-Applied-Bioinformatics Public
Forked from applied-bioinformatics/An-Introduction-To-Applied-BioinformaticsInteractive lessons in bioinformatics.
Python Other UpdatedJul 19, 2021 -
-
supervenn Public
Forked from gecko984/supervennsupervenn: precise and easy-to-read multiple sets visualization in Python
Python MIT License UpdatedJun 23, 2021 -
-
-
-
twilight Public
Forked from ghoresh11/twilightAll scripts used for the analysis of the twilight of the pan-genome, and scripts available for others to apply similar analysis
R GNU General Public License v3.0 UpdatedMar 30, 2021 -
-
-
defiant Public
Forked from hhg7/defiantDifferential methylation: Easy, Fast, Identification and ANnoTation
Shell GNU General Public License v2.0 UpdatedDec 18, 2020 -
GenAPI Public
Forked from MigleSur/GenAPIGene Absence Presence Identification tool.
Shell GNU General Public License v3.0 UpdatedAug 26, 2020 -
-
PaeGWAS Public
Forked from isana18/PaeGWASSource code for publication "The Pseudomonas aeruginosa accessory genome elements influence virulence towards Caenorhabditis elegans"
R MIT License UpdatedNov 7, 2019 -
plasmid_analysis Public
Forked from replikation/plasmid_analysisRepository for https://www.nature.com/articles/s41598-019-47758-5
Shell GNU General Public License v3.0 UpdatedOct 17, 2019