MOCHA_Manuscript

This repository is meant for code required for the MOCHA manuscript. Within this repository you will find the code to replicate the main manuscript figure results.

Figures

• Figure 1: Overview Figure.
• Figure 2: Accessibility Comparisons
• Figure 3: Zero-inflated Differential and Correlation Analyses
• Figure 4: Alternative TSS Usage in CD16 Monocytes
• Figure 5: Longitudinal Dynamics of COVID-19 Responders in the CD16 Monocytes

Supplemental Figures

MOCHA R package

MOCHA is available for direct installation from CRAN. Additionally, it can be installed directly from Github following the instructions here.