Differentiable SDE solvers with GPU support and efficient sensitivity analysis.

xSPDE is an extensible toolbox for solving Stochastic Partial Differential Equations.

Explorations on cross-hatching, engraving, and similar non-photorealistic rendering.

Vim-fork focused on extensibility and usability

Cell cycle inference in single-cell RNA-seq

A PyTorch library for implementing flow matching algorithms, featuring continuous and discrete flow matching implementations. It includes practical examples for both text and image modalities.

Conversion between scRNA-seq objects

Code for "Learning Unknown Intervention Targets in Structural Causal Models from Heterogeneous Data". (Proc. AISTATS 2024)

Method based on neural networks and variational inference for causal discovery under latent interventions, i. e. learning a shared causal graph among a infinite mixture (under a Dirichlet process p…

Sample files to accompany the FT's Chart Doctor column

Elegant easy-to-use neural networks + scientific computing in JAX. https://docs.kidger.site/equinox/

A polyvalent C++ FEM library

Fast algorithms for GLM-PCA.

The Python Control Systems Library is a Python module that implements basic operations for analysis and design of feedback control systems.

PythonLinearNonLinearControl is a library implementing the linear and nonlinear control theories in python.

Awesome resources for learning control theory

PyTorch version of Stable Baselines, reliable implementations of reinforcement learning algorithms.

An elegant PyTorch deep reinforcement learning library.

Causal Modeling with Stationary Diffusions, AISTATS 2024

A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.

Solutions of Reinforcement Learning, An Introduction

A fast and differentiable model predictive control (MPC) solver for PyTorch.

A collection of resources and papers on Diffusion Models

Statistical Rethinking (2nd ed.) with NumPyro

Flax is a neural network library for JAX that is designed for flexibility.

🏛️A research-friendly codebase for fast experimentation of single-agent reinforcement learning in JAX • End-to-End JAX RL

BlackJAX is a Bayesian Inference library designed for ease of use, speed and modularity.

Modeling toolkit for biochemical simulation

📖 A collection of pure bash alternatives to external processes.