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YongchaoDou committed Sep 23, 2022
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# SEPEPquant
Tripartite graph modeling enables comprehensive protein isoform characterization in shotgun proteomics

[<img src="https://github.com/bzhanglab/SEPEPquant/blob/main/doc/protein-and-peptide-distribution.jpg" width=400 class="center">]

[<img src="https://github.com/bzhanglab/SEPEPquant/blob/main/doc/parsimony-selection.jpg" width=400 class="center">]

[<img src="https://github.com/bzhanglab/SEPEPquant/blob/main/doc/sepep-quantification.jpg" width=400 class="center">]

# Usage
Curently, SEPEPquant only support [FragPipe](https://fragpipe.nesvilab.org/) processed Label free and TMT data.

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