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Cookie consent #41

Merged
merged 2 commits into from
Mar 7, 2024
Merged

Cookie consent #41

merged 2 commits into from
Mar 7, 2024

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iblacksand
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* windows target

* log10p for meta analysis and fix overlap id for ORA

* remove printing

* idmapping fixes

* fix id mapping

* add score check

* fix errors with bars

* add size start

* improve id mapping for metabolites

* possible fix

* diagnositics

* add null checks

* more diagnostics

* fix metabolite mapping

* add try to error prone section

* bigger block

* edit links if possible

* potential fix

* diagnostics

* fdr fix if equal to 1

* revert broken links

* fix bounds

* fix multi-list with no descriptions

* fix multiora

* fix ora gene set des being overridden

* add place for no genesetdes

* address another black hole

* fix error with genesetdes

* fix example

* fix gene set prob

* test meta-p

* fix variable name

* stop

* fix logp calculation

* fix nes vals

* fix meta-p if only one p_val

* fix ora meta logp

* better ora signs

* better log p for single lists

* make gene set null

* better logp

* add printing

* only add colnames if success possible

* fix negative meta-p

* fix hmdb ora coloring

* use two to one

* remove empty argument

* custom two2one'

* abs p vals

* diagnostics

* remove bad filter

* remove print

* add flips

* revert

* add better flip

* fix flips

* fix flips

* use paste0

* use new bool_flips

* use new variable

* use abs for single meta analysis

* more small ora fixes

* remove bad genetable init

* diagnostic

* possible fix

* fix diagn

* more fixes

* more diag

* alternative meta

* alternative meta

* fix starting i

* diags

* more updates

* na check

* fix index

* add better p value check

* fix flips

* revert link if needed

* add cookie consent
@iblacksand iblacksand merged commit d6672da into bzhanglab:master Mar 7, 2024
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