Opiniated RAG for integrating GenAI in your apps 🧠 Focus on your product rather than the RAG. Easy integration in existing products with customisation! Any LLM: GPT4, Groq, Llama. Any Vectorstore: …

Finetune Llama 3.3, DeepSeek-R1 & Reasoning LLMs 2x faster with 70% less memory! 🦥

Detectron2 is a platform for object detection, segmentation and other visual recognition tasks.

Command-line program to download image galleries and collections from several image hosting sites

A PyTorch Library for Accelerating 3D Deep Learning Research

Official git repository for Biopython (originally converted from CVS)

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

Deforum extension for AUTOMATIC1111's Stable Diffusion webui

PyWavelets - Wavelet Transforms in Python

Cloud-native genomic dataframes and batch computing

Scripts to download genomes from the NCBI FTP servers

Reinforcement learning environments with musculoskeletal models

tools for adding mutations to existing .bam files, used for testing mutation callers

Tools for processing and analyzing structural variants.

A flexible, scalable, and reproducible pipeline to automate variant calling from raw sequence reads, with lots of bells and whistles - for sampled individuals, and for pool sequencing.

Experimental String Graph construction and processing

Code repository for the T2T-Y paper

A python wrapper around SURVIVOR

10x single cell short- and long-read RNA sequencing

Joint variant calling with GATK4 HaplotypeCaller, Google DeepVariant 1.0.0 and Strelka2, coordinated via Snakemake.

Maximum-coverage algorithm for genomic variants

Translate nucleotide --> amino acid sequence