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Commits on Mar 19, 2024

• Removed deprecated ggplot code, changed default values for assembly and normlization

  schmic05

  committed
  c6037ea

Commits on Jan 14, 2024

• Improve nv probes exploratory section

  bariskalem

  committed
  87ca26b

Commits on Dec 28, 2023

• Improve assembly selection for EPICv1 and 450K platforms / Address bugs

  bariskalem

  committed
  8ee0054

Commits on Oct 4, 2023

• EPIC v2 update initial commit

  bariskalem

  committed
  cb9cf3c

Commits on Aug 1, 2023

• Updated DESCRIPTION and NEWS

  schmic05

  committed
  63ebe6c

Commits on Apr 20, 2023

• Temporarlily removed the GLAD dependency

  schmic05

  committed
  0d683f7

Commits on Apr 18, 2023

• Fixed bug in differential varibility function

  schmic05

  committed
  f6f3e71

Commits on Aug 19, 2022

• Added probesMMBC to options.txt

  schmic05

  committed
  0096244

Commits on May 24, 2022

• filled up missing entries in NEWS

  lutsik

  committed
  1f6834d

• # WARNING: head commit changed in the meantime

  Show description for b6a0d95
  lutsik

  committed
  b6a0d95

• Merge branch 'feature/new_normalization_methods'

  lutsik

  committed
  1715e91

Commits on May 19, 2022

• implemented pOOBAH detection p-value calculation method from SeSaMe

  lutsik

  committed
  fa20522

Commits on Nov 17, 2021

• Removed support for RefFreeEWAS

  schmic05

  committed
  fd0ddd8

Commits on Oct 15, 2021

• integrated new normalization methods into frontend routines

  lutsik

  committed
  5c25484

Commits on May 11, 2021

• Merge branch 'feature/MouseMethylationBeadChip' of https://github.com/epigen/RnBeads

  demuellae

  committed
  cf76f5b

Commits on Feb 18, 2021

• Changed some of the option default values

  schmic05

  committed
  5e02d37

Commits on Feb 7, 2021

• DJ fix for shiny AND function in file/dir input

  demuellae

  committed
  cebe03c

Commits on Feb 6, 2021

• added more normalization methods to options

  

  lutsik

  committed
  969e4b1

• -- QC for MMBC array

  Show description for 76233ce
  

  lutsik

  committed
  76233ce

Commits on Jan 4, 2021

• Small adjustemnts in rnb.execute.pOOBAH, Updated documentation

  schmic05

  committed
  b2de0d6

Commits on Dec 18, 2020

• Updated DESCRIPTION and NEWS

  schmic05

  committed
  f91a044

Commits on May 13, 2020

• Implemented conversion from RnBeadRawSet to RGChannelSet (minfi)

  schmic05

  committed
  24d18ca

Commits on Dec 3, 2019

• Fixed failing diffVar test, updated documentation

  schmic05

  committed
  a5d75b5

Commits on Oct 30, 2019

• Fixed bug in paired analysis for differential variability

  schmic05

  committed
  8fdd83a

Commits on Oct 10, 2019

• Fixed nonACII for immune and age prediction

  schmic05

  committed
  a75939b

Commits on Jun 18, 2019

• Updated DESCRIPTION and NEWS

  schmic05

  committed
  265e7b4

Commits on May 28, 2019

• Merge branch 'feature/RnBeads2.0' of github.com:epigen/RnBeads into feature/RnBeads2.0

  Show description for 887bc7a
  schmic05

  committed
  887bc7a

• Updated DESCRIPTION and NEWS

  schmic05

  committed
  0b48e6f

Commits on May 24, 2019

• Fixed failed test, GLAD dependency not available

  schmic05

  committed
  892dae0

Commits on Apr 25, 2019

• Bumped version and updated NEWS

  schmic05

  committed
  ef48cf8

Commits on Mar 15, 2019

• Added new publication to CITATION

  schmic05

  committed
  f1e4f05

Commits on Feb 28, 2019

• Bumped version and updated NEWS

  schmic05

  committed
  3db2474

Commits on Oct 23, 2018

• bumped version to 1.99 (for 2.0 release)

  demuellae

  committed
  47baba4

• Bumped version and updated news

  demuellae

  committed
  2d5378f

Commits on Oct 19, 2018

• Deactivated intersample plots for BS sets and Added section for CNV estimation in the vignette

  schmic05

  committed
  9f176b4

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