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Conda CI

Conda CI #13

Workflow file for this run

name: Conda CI
on: [push, pull_request]
jobs:
build:
runs-on: ubuntu-latest
steps:
- name: Check out repository code
uses: actions/checkout@v2
- name: Set up Conda
uses: conda-incubator/setup-miniconda@v2
with:
auto-activate-base: false
- name: Create Conda environment
run: conda env create --file env.yml
- name: Activate Conda environment and install intreg_env
run: |
source $CONDA/bin/activate intreg_env
pip install -e .
- name: Verify Conda environment
run: |
source $CONDA/bin/activate intreg_env
conda info --all
conda list
- name: Run Pytest and Coverage
run: |
source $CONDA/bin/activate intreg_env
pytest --cov=intreg src/tests/ --cov-report=xml
- name: Upload Coverage to Codecov
uses: codecov/codecov-action@v2
with:
files: ./coverage.xml
token: ${{ secrets.CODECOV_TOKEN }}
- name: Debug Codecov Bash (Optional)
run: bash <(curl -s https://codecov.io/bash) -t ${{ secrets.CODECOV_TOKEN }}