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59 Open 438 Closed
59 Open 438 Closed
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Issues list

Most of the SVs has "SUPPORT=2". Should I merge some SVs?
#535 opened Dec 17, 2024 by SenLiBio
Can >3M deletions be detected by sniffles?
#534 opened Dec 3, 2024 by yue131
1
Potential missing calls when using ngmlr for alignment
#533 opened Dec 2, 2024 by jamesdgalbraith
1
Ref base always 'N', despite providing --reference FASTA
#531 opened Nov 20, 2024 by bbimber
Dramatic change in GTs with smaller size DEL SV bug
#530 opened Nov 20, 2024 by tuannguyen8390
@hermannromanek
10
Very high proportion 0/1 genotype in DUP, BND and INV
#529 opened Nov 15, 2024 by hui-liu
2
sniffles 2.5 produces variant longer than contig
#522 opened Nov 11, 2024 by bbimber
5
Usage of Sniffles2 for direct RNA sequencing output
#517 opened Nov 5, 2024 by kaltinel
1
bug: BND evidence from supplementary alignements discarded (sometimes)
#513 opened Oct 23, 2024 by yfarjoun
Type of BND connection mislabeled enhancement
#510 opened Sep 20, 2024 by ryan-moreno
@lfpaulin
false genotyping large deletion enhancement
#505 opened Aug 13, 2024 by DHmeduni 2.5
@lfpaulin
18
Are calls made from supplementary alignments? bug
#502 opened Aug 3, 2024 by jo-mc 2.6
2
Invalid END position
#497 opened Jul 18, 2024 by ACEnglish
@hermannromanek
3
Difference between SUPPORT, DV and RNAMES
#496 opened Jul 17, 2024 by kamilafras
3
Phailed SV phasing
#488 opened Jun 21, 2024 by agatafant
3
Detection of Reciprocal BNDs
#486 opened Jun 11, 2024 by Carly-KT
Significantly reduced DEL SUPPORT bug
#484 opened Jun 5, 2024 by weishwu
5
Large deletion filtered out enhancement
#479 opened May 10, 2024 by sumudu-rangika
@lfpaulin
3
Overcalling BNDs?
#472 opened Apr 11, 2024 by tsneddon
1
Force Calling Errors bug
#465 opened Apr 2, 2024 by ACEnglish
@hermannromanek
2
How to make sniffles do a better job in splitting insertions at the same location into two het calls?
#460 opened Mar 6, 2024 by ymcki
1
How to reduce memory consumption during population calling?
#448 opened Jan 8, 2024 by tnguyengel 2.5
@hermannromanek
13
Enhancement: sample ID handling enhancement
#443 opened Dec 1, 2023 by ptrebert
2
Compatibility issue for consensus creation
#442 opened Nov 27, 2023 by Mossy-Frog
6
Incomplete RNAMES? bug
#437 opened Oct 26, 2023 by weishwu
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