Fix base.config #282
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| name: CI Tests | |
| on: [push, pull_request] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v2 | |
| - name: Set up JDK 11 | |
| uses: actions/setup-java@v2 | |
| with: | |
| java-version: '11' | |
| distribution: 'adopt' | |
| - name: Setup Nextflow ${{ matrix.nextflow }} | |
| uses: nf-core/setup-nextflow@v1 | |
| with: | |
| version: "latest-edge" | |
| - name: Install nf-test | |
| run: | | |
| wget -qO- get.nf-test.com | bash -s 0.9.0-rc2 | |
| sudo mv nf-test /usr/local/bin/ | |
| - name: Set up Docker Buildx | |
| uses: docker/setup-buildx-action@v3 | |
| - name: Build Docker | |
| uses: docker/build-push-action@v5 | |
| with: | |
| context: . | |
| push: false | |
| load: true | |
| tags: "genepi/mtdna-server-2" | |
| cache-from: type=gha | |
| cache-to: type=gha,mode=max | |
| - name: Run Tests | |
| run: nf-test test |