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Commits on Jul 31, 2017

• Release 0.7.16-r1180

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Commits on Jul 30, 2017

• Merge pull request lh3#60 from jdagilliland/typo

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• Merge pull request lh3#139 from jmarshall/fixes

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Commits on Jun 27, 2017

• Add "bwa mem -o FILE" synonym and documentation

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Commits on May 31, 2016

• Merge branch 'dev'

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• Release bwa-0.7.15-r1140

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Commits on Mar 31, 2016

• Include in man page info on read types

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• Fix a few typos in man page

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Commits on Mar 17, 2016

• Minor doc fix

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  jdagilliland

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Commits on Jan 26, 2016

• ropebwt2 for bwt construction

  lh3

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Commits on Dec 28, 2014

• Released 0.7.12

  lh3

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Commits on Dec 23, 2014

• Released bwa-0.7.11-r1034

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Commits on Dec 21, 2014

• updated documentations

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Commits on Nov 18, 2014

• fine tune the wrapper scripts

  lh3

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Commits on May 19, 2014

• Release bwa-0.7.9-r783

  lh3

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• Release bwa-0.7.9-r782

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Commits on May 12, 2014

• updated maual page

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Commits on May 11, 2014

• r762: cleanup for the new release; unfinished

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Commits on Mar 31, 2014

• r455: release bwa-0.7.8

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• dev-r451: fixed a few bugs when -A!=1

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Commits on Feb 25, 2014

• Released bwa-0.7.7-r441

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Commits on Jan 31, 2014

• Released bwa-0.7.6-r432

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Commits on May 25, 2013

• updated README

  lh3

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Commits on Apr 23, 2013

• Released bwa-0.7.4-r385

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Commits on Apr 17, 2013

• r377: increased unpaired penalty from 9 to 17

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Commits on Mar 16, 2013

• Release bwa-0.7.3a-r367

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Commits on Mar 15, 2013

• Release BWA-0.7.3-r366

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Commits on Mar 12, 2013

• r363: XA=>XP; output mapQ in XP

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Commits on Mar 9, 2013

• Release bwa-0.7.2-r351

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• Improving 'properly paired' flag.

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Commits on Mar 8, 2013

• Release 0.7.1-r347

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Commits on Mar 7, 2013

• r340: feature freeze; updated the manpage

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Commits on Feb 28, 2013

• r306: introduce clipping penalty

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Commits on Feb 27, 2013

• r303: bugfix - wrong band width when CIGAR

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• r302: updated the manpage

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