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1. cubeglm cubeglm Public

   Python implementation of general linear model for quantifying fluorophores in fluorescent hyperspectral images

   Jupyter Notebook 4

2. mtmcskat mtmcskat Public

   Cluster-friendly interface for SKAT with adaptive resampling, multi-threading over SNP windows and permutations, and higher-level parallelization over chromosomes/scaffolds.

   R 4

3. GMOnotebook GMOnotebook Public

   Templates for workflows cross-analyzing fluorescent hyperspectral regression with deep segmentation to study plant tissue culture transformation rates

   Jupyter Notebook 1 1

4. cubeml cubeml Public

   Interface to apply machine learning to segmentation of hyperspectral images (hypercubes)

   Jupyter Notebook

5. gpt-revcomp-eval gpt-revcomp-eval Public

   Evals for GPT model abilities to provide reverse complements of DNA sequences

   Jupyter Notebook 1

6. terminal_jupyter_intro terminal_jupyter_intro Public

   Introduction tutorial for command line basics