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Code at the speed of thought – Zed is a high-performance, multiplayer code editor from the creators of Atom and Tree-sitter.

Rust 51,685 3,252 Updated Dec 21, 2024

segmentation module for SmartSPIM cloud pipeline

Python 2 1 Updated Dec 17, 2024

Stitching and fusion pipeline in the cloud

Python 4 2 Updated Nov 19, 2024

Docker local slurm cluster

Dockerfile 55 56 Updated Apr 25, 2024

All Algorithms implemented in Python

Python 195,738 45,975 Updated Dec 20, 2024

High resolution postmortem image registration and layer reconstruction of human cortex from serially-sectioned of in situ hybridization images.

C++ 3 1 Updated Aug 3, 2015

Documentation and examples demonstrating how to access data from the Allen Brain Cell Atlas

Jupyter Notebook 54 22 Updated Dec 19, 2024

Automated machine learning for analyzing, interpreting, and designing biological sequences

Jupyter Notebook 166 22 Updated Aug 3, 2023

A repository for development of custom zarr storage classes

Python 2 Updated Dec 7, 2024

Self-supervised representation learning for self-similarity search of galaxies in the UNIONS Survey

Jupyter Notebook 3 1 Updated Sep 15, 2023

https://www.youtube.com/channel/UC34rW-HtPJulxr5wp2Xa04w?sub_confirmation=1

Jupyter Notebook 4,019 2,429 Updated Dec 18, 2024

Get Your Brain Together Neuroimage Registration Workshops and Hackathons

Jupyter Notebook 20 12 Updated Nov 14, 2024