sailepradh
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pipeline_documentation Public
Forked from SMD-Bioinformatics-Lund/pipeline_documentationThis repo generates automatic documentation for pipelines or tools by using a pipeline.yaml file and producing both HTML and MD documents. The MD document can be uploaded to a readthedocs server fo…
Python UpdatedFeb 29, 2024 -
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coyote_cli Public
Forked from SMD-Bioinformatics-Lund/coyote_clicommand line interface for coyote
Python UpdatedJan 4, 2024 -
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test-datasets Public
Forked from nf-core/test-datasetsTest data to be used for automated testing with the nf-core pipelines
MIT License UpdatedAug 16, 2023 -
Data-Apps Public
Forked from amitvkulkarni/Data-AppsA collection of application which are built on open source technologies/frameworks like R Shiny, Plotly-Dash, Flask.
Python MIT License UpdatedMar 17, 2023 -
User-Login-System-Tutorial Public
Forked from LukePeters/User-Login-System-TutorialLearn how to build a basic user login system using Python, Flask, and MongoDB.
CSS UpdatedFeb 8, 2023 -
RareDisease_RNA_workflow Public
Forked from genomic-medicine-sweden/RareDisease_RNA_workflowNextflow UpdatedJan 25, 2023 -
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Twist_DNA_Hematology Public
Forked from genomic-medicine-sweden/poppyPython GNU General Public License v3.0 UpdatedNov 8, 2022 -
sailepradh.github.io Public
Forked from laderast/academic_site_workshopPersonal website of Sailendra Pradhananga
JavaScript MIT License UpdatedSep 23, 2022 -
nextflow_rnaseqfus Public
Forked from SMD-Bioinformatics-Lund/nextflow_rnaseqfusFusion genes identification pipeline
Perl UpdatedSep 16, 2022 -
Biohackathon_Nepal Public
Github repo for the tutorial prepared for BioHackathon
Python MIT License UpdatedSep 9, 2022 -
snakemake-novice-bioinformatics Public
Forked from carpentries-incubator/snakemake-novice-bioinformaticsIntroduction to Snakemake for Bioinformatics
Python Other UpdatedAug 11, 2022 -
rnafusion Public
Forked from nf-core/rnafusionRNA-seq analysis pipeline for detection gene-fusions
Nextflow MIT License UpdatedJul 12, 2022 -
bioinformatics-coffee-hour Public
Forked from harvardinformatics/bioinformatics-coffee-hourShort lessons from FAS Informatics coffee hour
HTML MIT License UpdatedJun 22, 2022 -
workflows-nextflow Public
Forked from carpentries-incubator/workflows-nextflowWorkflow management with Nextflow and nf-core
Python Other UpdatedJun 13, 2022 -
clarity_scripts Public
Additional scripts for integration into Clarity Lims
Python UpdatedMay 31, 2022 -
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DGE_workshop_salmon_online Public
Forked from hbctraining/DGE_workshop_salmon_onlinedifferential gene expression from hbc
HTML UpdatedMay 16, 2022 -
SomaticPanelPipeline Public
Forked from SMD-Bioinformatics-Lund/SomaticPanelPipelinePerl UpdatedApr 28, 2022 -
ML_medbioinfo Public
Forked from bjornwallner/ML_medbioinfoMachine Learning in Medical Bioinformatics
Jupyter Notebook UpdatedApr 13, 2022 -
rnaseq Public
Forked from nf-core/rnaseqRNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
Nextflow MIT License UpdatedNov 1, 2021 -
raredisease Public
Forked from SMD-Bioinformatics-Lund/rarediseaseCall and score variants from WGS/WES of rare disease patients.
Nextflow MIT License UpdatedOct 26, 2021 -
free-programming-books Public
Forked from bishwasBhatta/free-programming-books📚 Freely available programming books
Other UpdatedSep 16, 2021